RNA–Protein interactions for RNA: ENST00000339269.5

CDK5RAP1-201, Transcript of CDK5 regulatory subunit associated protein 1, humanhuman

TSL 1 (best) BASIC

Gene CDK5RAP1, Length 1,891 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1-201ENST00000339269 HPDLQ96IR7 371 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 C9orf72Q96LT7 481 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ADAMTS10Q9H324 1103 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 C10orf88Q9H8K7 445 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 AGAP1Q9UPQ3 857 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 C2CD2Q9Y426 696 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CEP83Q9Y592 693 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 H3BRB1 525 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CA12O43570 354 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ALDH1A1P00352 501 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ABHD2P08910 425 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 PECAM1P16284 738 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 LIG3P49916 1009 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ARSEP51690 589 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 NDST1P52848 882 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GAD2Q05329 585 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 GRB14Q14449 540 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 BBS12Q6ZW61 710 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 SPATS2Q86XZ4 545 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 BBOF1Q8ND07 529 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 CMASQ8NFW8 434 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 KAT2BQ92831 832 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ZMAT2Q96NC0 199 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 WDR83Q9BRX9 315 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TMEM121Q9BTD3 319 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TSPYL1Q9H0U9 437 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 TUT1Q9H6E5 874 aaKnown RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 ZWILCHQ9H900 591 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 BARX2Q9UMQ3 279 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 EFR3BQ9Y2G0 817 aa13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 FARP1Q9Y4F1 1045 aaPredicted RBP13.65□□□□□ -0.22
CDK5RAP1-201ENST00000339269 M0QYV0 167 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 GABBR2O75899 941 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 HMGCRP04035 888 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 VDRP11473 427 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 KDELR1P24390 212 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 MIPP30301 263 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 GRM5P41594 1212 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 MAGEA4P43358 317 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 IFT88Q13099 833 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 HIC1Q14526 733 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 TAF1CQ15572 869 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 PKDCCQ504Y2 493 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 SH3PXD2AQ5TCZ1 1133 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 GPR142Q7Z601 462 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 LRRC34Q8IZ02 419 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 NPLOC4Q8TAT6 608 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 UBA3Q8TBC4 463 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 ACTL9Q8TC94 416 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 MAML1Q92585 1016 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 PRCCQ92733 491 aaPredicted RBP13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 MAML3Q96JK9 1138 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 RBM15Q96T37 977 aaKnown RBP eCLIP13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 OSBPL7Q9BZF2 842 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 CDHR5Q9HBB8 845 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 PCDH9Q9HC56 1237 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 SAGE1Q9NXZ1 904 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 DPP3Q9NY33 737 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 ITGA11Q9UKX5 1188 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 ZNF148Q9UQR1 794 aa13.64□□□□□ -0.23
CDK5RAP1-201ENST00000339269 ENDOD1O94919 500 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 TRUB2O95900 331 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 CCNA1P78396 465 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 OTUD4Q01804 1114 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 LMNB2Q03252 620 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 GPS1Q13098 491 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 DUSP28Q4G0W2 176 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 ANKRD22Q5VYY1 191 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 LCLAT1Q6UWP7 414 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 GSTA5Q7RTV2 222 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 PIGWQ7Z7B1 504 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 ANKRD23Q86SG2 305 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 PACS2Q86VP3 889 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 PPP1R13LQ8WUF5 828 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 NLRP7Q8WX94 980 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 ARHGEF2Q92974 986 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 PRMT1Q99873 361 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 FOXP3Q9BZS1 431 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 INTS9Q9NV88 658 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 WDR35Q9P2L0 1181 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 TMEM120BA0PK00 339 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 C2CD4BA6NLJ0 364 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 GPR32O75388 356 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 CETN2P41208 172 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 CTCFP49711 727 aaPredicted RBP13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 CRHR2Q13324 411 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 ZBTB6Q15916 424 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 C12orf29Q8N999 325 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 KHSRPQ92945 711 aaKnown RBP eCLIP13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 SAYSD1Q9NPB0 183 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 TPX2Q9ULW0 747 aaKnown RBP13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 NAALADL1Q9UQQ1 740 aa13.63□□□□□ -0.23
CDK5RAP1-201ENST00000339269 STRNO43815 780 aa13.62□□□□□ -0.23
CDK5RAP1-201ENST00000339269 CST8O60676 142 aa13.62□□□□□ -0.23
CDK5RAP1-201ENST00000339269 BANF1O75531 89 aa13.62□□□□□ -0.23
CDK5RAP1-201ENST00000339269 FSBPO95073 299 aa13.62□□□□□ -0.23
CDK5RAP1-201ENST00000339269 KRT7P08729 469 aa13.62□□□□□ -0.23
CDK5RAP1-201ENST00000339269 HSPA8P11142 646 aaKnown RBP13.62□□□□□ -0.23
CDK5RAP1-201ENST00000339269 LBX1P52954 281 aa13.62□□□□□ -0.23
CDK5RAP1-201ENST00000339269 DYNLT1P63172 113 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms