RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 POLNQ7Z5Q5 900 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 ANKS1BQ7Z6G8 1248 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 ADAT2Q7Z6V5 191 aaKnown RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 LRRC34Q8IZ02 419 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 RCOR2Q8IZ40 523 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 PPTC7Q8NI37 304 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 ARHGEF2Q92974 986 aaKnown RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 CCDC127Q96BQ5 260 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 MAGEB18Q96M61 343 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 CFAP57Q96MR6 1250 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 FNBP1Q96RU3 617 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 JPH2Q9BR39 696 aaPredicted RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 OSBPL8Q9BZF1 889 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 SLC28A3Q9HAS3 691 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 PARVAQ9NVD7 372 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 GABBR1Q9UBS5 961 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 SLC9A2Q9UBY0 812 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 SHOC2Q9UQ13 582 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 NOD1Q9Y239 953 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 USP15Q9Y4E8 981 aaPredicted RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 PCDHA11Q9Y5I1 949 aa11.37□□□□□ -0.59
RTN3-201ENST00000338850 MAFBQ9Y5Q3 323 aaPredicted RBP11.37□□□□□ -0.59
RTN3-201ENST00000338850 CDH23Q9H251 3354 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 TCRBV5S1A1TA0A578 114 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 HAS3O00219 553 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 PRPF4O43172 522 aaKnown RBP eCLIP11.36□□□□□ -0.593e-8■□□□□ 10.6
RTN3-201ENST00000338850 F2P00734 622 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 DLATP10515 647 aaKnown RBP11.36□□□□□ -0.59
RTN3-201ENST00000338850 HOXD8P13378 290 aaPredicted RBP11.36□□□□□ -0.59
RTN3-201ENST00000338850 KRT5P13647 590 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 ALADP13716 330 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 MYOGP15173 224 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 RRM1P23921 792 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 ARL2P36404 184 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 PSEN2P49810 448 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 ITGA8P53708 1063 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 IFI35P80217 286 aaPredicted RBP11.36□□□□□ -0.59
RTN3-201ENST00000338850 EMC2Q15006 297 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 MORF4L2Q15014 288 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 TDRD10Q5VZ19 366 aaKnown RBP11.36□□□□□ -0.59
RTN3-201ENST00000338850 MAEAQ7L5Y9 396 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 BRSK2Q8IWQ3 736 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 PARP9Q8IXQ6 854 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 DHX37Q8IY37 1157 aaKnown RBP11.36□□□□□ -0.59
RTN3-201ENST00000338850 EXOC8Q8IYI6 725 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 CFAP61Q8NHU2 1237 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 MDM1Q8TC05 714 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 FNIP1Q8TF40 1166 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 NKD2Q969F2 451 aaPredicted RBP11.36□□□□□ -0.59
RTN3-201ENST00000338850 SCLT1Q96NL6 688 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 POLR3FQ9H1D9 316 aaPredicted RBP11.36□□□□□ -0.59
RTN3-201ENST00000338850 LRRC4CQ9HCJ2 640 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 CHST7Q9NS84 486 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 DDX56Q9NY93 547 aaKnown RBP11.36□□□□□ -0.59
RTN3-201ENST00000338850 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.36□□□□□ -0.59
RTN3-201ENST00000338850 NINJ2Q9NZG7 142 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 PKD2L1Q9P0L9 805 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 GTF2IRD1Q9UHL9 959 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 ANAPC5Q9UJX4 755 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 AGO2Q9UKV8 859 aaKnown RBP11.36□□□□□ -0.59
RTN3-201ENST00000338850 PCDHGC3Q9UN70 934 aa11.36□□□□□ -0.59
RTN3-201ENST00000338850 A0A0B4J269 797 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 TMEM120BA0PK00 339 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 DNALI1O14645 258 aaPredicted RBP11.35□□□□□ -0.59
RTN3-201ENST00000338850 ZNF286BP0CG31 522 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 UBA1P22314 1058 aaKnown RBP11.35□□□□□ -0.59
RTN3-201ENST00000338850 MMP8P22894 467 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 PIK3CAP42336 1068 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 MNAT1P51948 309 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 ACTR2P61160 394 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 YWHAEP62258 255 aaKnown RBP11.35□□□□□ -0.59
RTN3-201ENST00000338850 MAMLD1Q13495 774 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 MFSD10Q14728 455 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 GPNMBQ14956 572 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 SKIDA1Q1XH10 827 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 CELF3Q5SZQ8 465 aaKnown RBP11.35□□□□□ -0.59
RTN3-201ENST00000338850 PPP2R2DQ66LE6 453 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 WDR49Q8IV35 697 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 FEZF2Q8TBJ5 459 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 ZNF516Q92618 1163 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 PRMT1Q99873 361 aaKnown RBP11.35□□□□□ -0.59
RTN3-201ENST00000338850 NCAPGQ9BPX3 1015 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 KATNAL1Q9BW62 490 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 PRDM6Q9NQX0 595 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 TOPORSQ9NS56 1045 aaPredicted RBP11.35□□□□□ -0.59
RTN3-201ENST00000338850 ADAM22Q9P0K1 906 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 PRKAG3Q9UGI9 489 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 SLC24A2Q9UI40 661 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 SMG5Q9UPR3 1016 aaKnown RBP11.35□□□□□ -0.59
RTN3-201ENST00000338850 ARL2BPQ9Y2Y0 163 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 TANC1Q9C0D5 1861 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 SCN5AQ14524 2016 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 CNTNAP2Q9UHC6 1331 aa11.35□□□□□ -0.59
RTN3-201ENST00000338850 PRUNE2Q8WUY3 3088 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 EYSQ5T1H1 3165 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 TLDC2A0PJX2 215 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 TMEM191CA6NGB0 347 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 ATP5HO75947 161 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 WFS1O76024 890 aa11.34□□□□□ -0.59
RTN3-201ENST00000338850 TJP3O95049 919 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms