RNA–Protein interactions for RNA: ENST00000337620.8

CBX3-201, Transcript of chromobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CBX3, Length 2,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-201ENST00000337620 OTOP2Q7RTS6 562 aa15.5■□□□□ 0.07
CBX3-201ENST00000337620 CEP57Q86XR8 500 aa15.5■□□□□ 0.07
CBX3-201ENST00000337620 CEP112Q8N8E3 955 aa15.5■□□□□ 0.07
CBX3-201ENST00000337620 PCED1BQ96HM7 432 aa15.5■□□□□ 0.07
CBX3-201ENST00000337620 SLC4A5Q9BY07 1137 aa15.5■□□□□ 0.07
CBX3-201ENST00000337620 DUSP16Q9BY84 665 aa15.5■□□□□ 0.07
CBX3-201ENST00000337620 FNDC1Q4ZHG4 1894 aaPredicted RBP15.5■□□□□ 0.07
CBX3-201ENST00000337620 UQCRHLA0A096LP55 91 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 SIGLEC16A6NMB1 481 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 UQCRHP07919 91 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 SNX16P57768 344 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 WDR5P61964 334 aaKnown RBP15.49■□□□□ 0.07
CBX3-201ENST00000337620 PLCB3Q01970 1234 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 TAP1Q03518 808 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 INTS6LQ5JSJ4 861 aaKnown RBP15.49■□□□□ 0.07
CBX3-201ENST00000337620 PPP1R15BQ5SWA1 713 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 FAM102AQ5T9C2 384 aaPredicted RBP15.49■□□□□ 0.07
CBX3-201ENST00000337620 CCDC181Q5TID7 509 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 FAM171A1Q5VUB5 890 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 FAM183BPQ6ZVS7 135 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 CREG2Q8IUH2 290 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 OR10T2Q8NGX3 314 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 STK32AQ8WU08 396 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 TMEM209Q96SK2 561 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 TMEM175Q9BSA9 504 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 IL23AQ9NPF7 189 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 METTL5Q9NRN9 209 aaKnown RBP15.49■□□□□ 0.07
CBX3-201ENST00000337620 USTQ9Y2C2 406 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 EFCAB14O75071 495 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 PROSCO94903 275 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 FAM200BP0CF97 657 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 NPR3P17342 541 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 RFC1P35251 1148 aaPredicted RBP15.49■□□□□ 0.07
CBX3-201ENST00000337620 ALDH7A1P49419 539 aaKnown RBP15.49■□□□□ 0.07
CBX3-201ENST00000337620 RNASE9P60153 205 aaKnown RBP15.49■□□□□ 0.07
CBX3-201ENST00000337620 TSPY1Q01534 308 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 SPOUT1Q5T280 376 aaKnown RBP15.49■□□□□ 0.07
CBX3-201ENST00000337620 TMEM110Q86TL2 294 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 SCUBE3Q8IX30 993 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 MCRS1Q96EZ8 462 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 MS4A14Q96JA4 679 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 GPR62Q9BZJ7 368 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 KRT82Q9NSB4 513 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 MARCH5Q9NX47 278 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 IP6K2Q9UHH9 426 aa15.49■□□□□ 0.07
CBX3-201ENST00000337620 TSC2P49815 1807 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 XPO1O14980 1071 aaKnown RBP15.48■□□□□ 0.07
CBX3-201ENST00000337620 DDX3YO15523 660 aaKnown RBP15.48■□□□□ 0.07
CBX3-201ENST00000337620 AP1G2O75843 785 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 BEST1O76090 585 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 LCP1P13796 627 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 SLC1A1P43005 524 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 TERF1P54274 439 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 GSCP56915 257 aaPredicted RBP15.48■□□□□ 0.07
CBX3-201ENST00000337620 MAP3K7CLP57077 242 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 DAB2IPQ5VWQ8 1189 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 FAM171BQ6P995 826 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 FAM35AQ86V20 835 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 UBL4BQ8N7F7 174 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 JOSD2Q8TAC2 188 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 GADD45GIP1Q8TAE8 222 aaPredicted RBP15.48■□□□□ 0.07
CBX3-201ENST00000337620 KRT35Q92764 455 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 BADQ92934 168 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 MYLPFQ96A32 169 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 PBKQ96KB5 322 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 SMARCAL1Q9NZC9 954 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 EHD2Q9NZN4 543 aa15.48■□□□□ 0.07
CBX3-201ENST00000337620 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.48■□□□□ 0.07
CBX3-201ENST00000337620 V9GYY5 206 aaPredicted RBP15.48■□□□□ 0.07
CBX3-201ENST00000337620 CTAGE15A4D2H0 777 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 ZBBXA8MT70 800 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 MIF4GDA9UHW6 222 aaKnown RBP15.47■□□□□ 0.07
CBX3-201ENST00000337620 PDE2AO00408 941 aaPredicted RBP15.47■□□□□ 0.07
CBX3-201ENST00000337620 CEP104O60308 925 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 GABBR2O75899 941 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 CTAGE8P0CG41 777 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 SSR1P43307 286 aaKnown RBP15.47■□□□□ 0.07
CBX3-201ENST00000337620 PLA2G4AP47712 749 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 CKAP4Q07065 602 aaKnown RBP15.47■□□□□ 0.07
CBX3-201ENST00000337620 FUT10Q6P4F1 479 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 CLEC20AQ6ZU45 233 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 CTAGE6Q86UF2 777 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 PIGZQ86VD9 579 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 LRRTM3Q86VH5 581 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 TMEM173Q86WV6 379 aaPredicted RBP15.47■□□□□ 0.07
CBX3-201ENST00000337620 CTAGE4Q8IX94 777 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 EMC1Q8N766 993 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 B3GALT6Q96L58 329 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 HSFY1Q96LI6 401 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 TMLHEQ9NVH6 421 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 SF3B1O75533 1304 aaKnown RBP eCLIP15.47■□□□□ 0.073e-6■■■□□ 15.6
CBX3-201ENST00000337620 SYN3O14994 580 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 PAPSS1O43252 624 aaPredicted RBP15.47■□□□□ 0.07
CBX3-201ENST00000337620 GRAP2O75791 330 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 OAZ2O95190 189 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 PAFAH1B1P43034 410 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 ACADSBP45954 432 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 MARCKSL1P49006 195 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 RABGGTBP53611 331 aa15.47■□□□□ 0.07
CBX3-201ENST00000337620 OGDHQ02218 1023 aa15.47■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms