RNA–Protein interactions for RNA: ENST00000337526.10

RTN4-202, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,790 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-202ENST00000337526 CISHQ9NSE2 258 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 LRRC4BQ9NT99 713 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 CHCHD3Q9NX63 227 aaKnown RBP14.28□□□□□ -0.12
RTN4-202ENST00000337526 SLC25A27O95847 323 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 CYP2C9P11712 490 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 CRYMQ14894 314 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 SV2CQ496J9 727 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 CCNJLQ8IV13 435 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 CCT7Q99832 543 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 GDF3Q9NR23 364 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP14.28□□□□□ -0.12
RTN4-202ENST00000337526 C16orf96A6NNT2 1141 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 CTSHP09668 335 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 RARAP10276 462 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 KPNB1Q14974 876 aaKnown RBP14.28□□□□□ -0.12
RTN4-202ENST00000337526 SPDYAQ5MJ70 313 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 PCNX4Q63HM2 1172 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 RFWD2Q8NHY2 731 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 HIC2Q96JB3 615 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 KIAA1257Q9ULG3 409 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 SIK3Q9Y2K2 1263 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 PCDHGC5Q9Y5F6 944 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 SLC30A1Q9Y6M5 507 aa14.28□□□□□ -0.12
RTN4-202ENST00000337526 MAGEA13PA6NCF6 341 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 SDR42E2A6NKP2 422 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 M0QYT0 321 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 NFIBO00712 420 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 HMBSP08397 361 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 VDRP11473 427 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 PCYT1AP49585 367 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 RARRES1P49788 294 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 AQP5P55064 265 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 BTKQ06187 659 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 STX5Q13190 355 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 ABRAQ8N0Z2 381 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 TEKT4Q8WW24 435 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 CYGBQ8WWM9 190 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 IL1RL2Q9HB29 575 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 PIK3CDO00329 1044 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 SLITRK3O94933 977 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 CALB2P22676 271 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 PDK2Q15119 407 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 FAM83EQ2M2I3 478 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 KIZQ2M2Z5 673 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 MCOLN2Q8IZK6 566 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 CGRRF1Q99675 332 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 CNPY3Q9BT09 278 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 DDIT4Q9NX09 232 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 MAP3K20Q9NYL2 800 aaKnown RBP14.27□□□□□ -0.12
RTN4-202ENST00000337526 GGA3Q9NZ52 723 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 PDP2Q9P2J9 529 aa14.27□□□□□ -0.12
RTN4-202ENST00000337526 FAM86B1E9PN63 330 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 PMPCBO75439 489 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 APOA4P06727 396 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 FAM86B2P0C5J1 330 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 MYL6P60660 151 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 EN1Q05925 392 aaPredicted RBP14.27□□□□□ -0.13
RTN4-202ENST00000337526 THEMIS2Q5TEJ8 643 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 DENND1BQ6P3S1 775 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 SCUBE1Q8IWY4 988 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 GMCL1P1Q8NEA9 526 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 GANCQ8TET4 914 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 WNK4Q96J92 1243 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 ASCC2Q9H1I8 757 aaPredicted RBP14.27□□□□□ -0.13
RTN4-202ENST00000337526 CATSPERBQ9H7T0 1116 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 GID8Q9NWU2 228 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 DCDC2Q9UHG0 476 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 PREX1Q8TCU6 1659 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 DCCP43146 1447 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 FAM200BP0CF97 657 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 GHRP10912 638 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 LAMB3Q13751 1172 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 SAMD7Q7Z3H4 446 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 ACOT1Q86TX2 421 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 EFHBQ8N7U6 833 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 PPP1R2P1Q96PQ5 205 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 PDCD2LQ9BRP1 358 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 DPP3Q9NY33 737 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 ZNF212Q9UDV6 495 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 BLOC1S6Q9UL45 172 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 USP18Q9UMW8 372 aa14.27□□□□□ -0.13
RTN4-202ENST00000337526 PTPN4P29074 926 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 SKOR1P84550 965 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 RASA2Q15283 850 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 DENND5BQ6ZUT9 1274 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 PGM2Q96G03 612 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 GPATCH2LQ9NWQ4 482 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 MOSPD1Q9UJG1 213 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 RICTORQ6R327 1708 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 SPATA31A5Q5VU36 1347 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 SPATA31A7Q8IWB4 1347 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 XPO1O14980 1071 aaKnown RBP14.26□□□□□ -0.13
RTN4-202ENST00000337526 TPST1O60507 370 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 PYGLP06737 847 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 HIST1H2AGP0C0S8 130 aaPredicted RBP14.26□□□□□ -0.13
RTN4-202ENST00000337526 C6orf222P0C671 652 aaPredicted RBP14.26□□□□□ -0.13
RTN4-202ENST00000337526 SUPT20HL2P0C7V6 817 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 ZCCHC18P0CG32 403 aa14.26□□□□□ -0.13
RTN4-202ENST00000337526 HSPA1AP0DMV8 641 aaKnown RBP14.26□□□□□ -0.13
RTN4-202ENST00000337526 HSPA1BP0DMV9 641 aaKnown RBP14.26□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms