RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 CALN1Q9BXU9 219 aa24.32■■□□□ 1.48
CLPTM1-201ENST00000337392 ZNF518BQ9C0D4 1074 aa24.32■■□□□ 1.48
CLPTM1-201ENST00000337392 SLC5A4Q9NY91 659 aa24.32■■□□□ 1.48
CLPTM1-201ENST00000337392 NINJ2Q9NZG7 142 aa24.32■■□□□ 1.48
CLPTM1-201ENST00000337392 HUNKP57058 714 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 PIGHQ14442 188 aaPredicted RBP24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 PMF1Q6P1K2 205 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 FAM183BPQ6ZVS7 135 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 SCUBE3Q8IX30 993 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 CYP4X1Q8N118 509 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 C2orf69Q8N8R5 385 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 ACTL9Q8TC94 416 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 CLEC4CQ8WTT0 213 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 SGK1O00141 431 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 PECAM1P16284 738 aaPredicted RBP24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 TFE3P19532 575 aaPredicted RBP24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 GOLGA7BQ2TAP0 167 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 TTC30AQ86WT1 665 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 RBM41Q96IZ5 413 aaKnown RBP24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 MIS12Q9H081 205 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 BARX2Q9UMQ3 279 aaPredicted RBP24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 PIN4Q9Y237 131 aaKnown RBP24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 SCN4AP35499 1836 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 RECQL4O94761 1208 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 EIF3BP55884 814 aaKnown RBP24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 OTUD4Q01804 1114 aaKnown RBP24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 SLMAPQ14BN4 828 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 GRK7Q8WTQ7 553 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 TRAIPQ9BWF2 469 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 LHX5Q9H2C1 402 aa24.31■■□□□ 1.48
CLPTM1-201ENST00000337392 MED7O43513 233 aa24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 TJP3O95049 919 aa24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 HOOK3Q86VS8 718 aa24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 GABBR2O75899 941 aa24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 MYL3P08590 195 aa24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 PAEPP09466 180 aa24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 LMO2P25791 158 aa24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 ATXN1P54253 815 aaKnown RBP24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 RBP5P82980 135 aa24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 EMC10Q5UCC4 262 aa24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 RUNDC3BQ96NL0 473 aa24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 TRIM6Q9C030 488 aaPredicted RBP24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 GEMIN8Q9NWZ8 242 aaKnown RBP24.3■■□□□ 1.48
CLPTM1-201ENST00000337392 MEIS3P2A8K0S8 358 aa24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 RABGGTBP53611 331 aa24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 POU5F1BQ06416 359 aa24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 MAIP1Q8WWC4 291 aa24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 GNEQ9Y223 722 aaKnown RBP24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 ZSWIM8A7E2V4 1837 aa24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 SPTLC1O15269 473 aa24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 CCDC130P13994 396 aa24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 PSEN1P49768 467 aa24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 ZNF467Q7Z7K2 595 aaPredicted RBP24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 RBM15Q96T37 977 aaKnown RBP eCLIP24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 STRIP2Q9ULQ0 834 aa24.29■■□□□ 1.48
CLPTM1-201ENST00000337392 EBAG9O00559 213 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 TTC4O95801 387 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 OASLQ15646 514 aaKnown RBP24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 SCYL2Q6P3W7 929 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 EXOC3L1Q86VI1 746 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 RXFP2Q8WXD0 754 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 NDRG1Q92597 394 aaKnown RBP24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 NMRK2Q9NPI5 230 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 MYADML2A6NDP7 307 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 KDELR1P24390 212 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 GRM5P41594 1212 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 SOX4Q06945 474 aaPredicted RBP24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 ANKRD22Q5VYY1 191 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 ALLCQ8N6M5 410 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 CCDC89Q8N998 374 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 KCTD6Q8NC69 237 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 OR6B3Q8NGW1 331 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 GTF3C2Q8WUA4 911 aaPredicted RBP24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 NT5C1AQ9BXI3 368 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 SAYSD1Q9NPB0 183 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 ITGA11Q9UKX5 1188 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 USP18Q9UMW8 372 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 FAM169AQ9Y6X4 670 aa24.28■■□□□ 1.48
CLPTM1-201ENST00000337392 LOC102724159A0A0B4J2E5 919 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 PWP2Q15269 919 aaKnown RBP24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 CNGA2Q16280 664 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 ZC3H18Q86VM9 953 aaKnown RBP24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 ARRDC4Q8NCT1 418 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 STAU2Q9NUL3 570 aaKnown RBP eCLIP24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 C2CD2Q9Y426 696 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 COL1A2P08123 1366 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 TCRBV7S3A2A0A539 114 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 FGFR1P11362 822 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 PDGFRAP16234 1089 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 ADORA2BP29275 332 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 YARSP54577 528 aaKnown RBP24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 ZC3H12AQ5D1E8 599 aaKnown RBP24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 IQSEC1Q6DN90 963 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 HIBCHQ6NVY1 386 aaPredicted RBP24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 RFX6Q8HWS3 928 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 ANKMY2Q8IV38 441 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 NIPA2Q8N8Q9 360 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 SNX27Q96L92 541 aa24.27■■□□□ 1.48
CLPTM1-201ENST00000337392 A6NJR5 290 aa24.26■■□□□ 1.47
CLPTM1-201ENST00000337392 F2P00734 622 aa24.26■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms