RNA–Protein interactions for RNA: ENST00000336916.8

FN1-202, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,435 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-202ENST00000336916 PLEKHM3Q6ZWE6 761 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 TERB1Q8NA31 727 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 ARL2BPQ9Y2Y0 163 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 IFNA14P01570 189 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 KITP10721 976 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 RUNX1T1Q06455 604 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 ZNF410Q86VK4 478 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 GBA2Q9HCG7 927 aaPredicted RBP12.74□□□□□ -0.37
FN1-202ENST00000336916 TUBE1Q9UJT0 475 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 A0A1B0GTH6 734 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 PNMA6AP0CW24 399 aaPredicted RBP12.74□□□□□ -0.37
FN1-202ENST00000336916 ERVK-10P10266 1014 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 AGBL2Q5U5Z8 902 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 ZNF280DQ6N043 979 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 STARD8Q92502 1023 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 ELMO2Q96JJ3 720 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 SLCO1B7G3V0H7 640 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 IFRD1O00458 451 aaPredicted RBP12.74□□□□□ -0.37
FN1-202ENST00000336916 PRMT3O60678 531 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 DIS3LQ8TF46 1054 aaKnown RBP12.74□□□□□ -0.37
FN1-202ENST00000336916 RANBP17Q9H2T7 1088 aaKnown RBP12.74□□□□□ -0.37
FN1-202ENST00000336916 TRABDQ9H4I3 376 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 TMX2Q9Y320 296 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 TRIM49BA6NDI0 452 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 SERPIND1P05546 499 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 GEMP55040 296 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 NCAPHQ15003 741 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 TRIP4Q15650 581 aaPredicted RBP12.74□□□□□ -0.37
FN1-202ENST00000336916 CLEC16AQ2KHT3 1053 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 FAM167BQ9BTA0 163 aa12.74□□□□□ -0.37
FN1-202ENST00000336916 CABYRO75952 493 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 KRT20P35900 424 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 PTGER2P43116 358 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 MAGEA9P43362 315 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 ERAP2Q6P179 960 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 CLMNQ96JQ2 1002 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 RBM15Q96T37 977 aaKnown RBP eCLIP12.73□□□□□ -0.372e-6■□□□□ 10.6
FN1-202ENST00000336916 CCDC189A1A4V9 331 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 PJA2O43164 708 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 VEGFAP15692 232 aaPredicted RBP12.73□□□□□ -0.37
FN1-202ENST00000336916 MRPL28Q13084 256 aaKnown RBP12.73□□□□□ -0.37
FN1-202ENST00000336916 SLC22A9Q8IVM8 553 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 RMND5AQ9H871 391 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 COPS7BQ9H9Q2 264 aaPredicted RBP12.73□□□□□ -0.37
FN1-202ENST00000336916 TRIM66O15016 1216 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 TCF3P15923 654 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 NAA20P61599 178 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 DPYDQ12882 1025 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 DYNC1I2Q13409 638 aaKnown RBP12.73□□□□□ -0.37
FN1-202ENST00000336916 USP10Q14694 798 aaKnown RBP12.73□□□□□ -0.37
FN1-202ENST00000336916 LLGL1Q15334 1064 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.73□□□□□ -0.379e-7■■□□□ 12.5
FN1-202ENST00000336916 CARD9Q9H257 536 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 ABCB6Q9NP58 842 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 SCN3BQ9NY72 215 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 A0A088AWK7 358 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 ZNF10P21506 573 aaPredicted RBP12.73□□□□□ -0.37
FN1-202ENST00000336916 PRKAA2P54646 552 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 STX3Q13277 289 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 CUL2Q13617 745 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 STARD3Q14849 445 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 NIPA1Q7RTP0 329 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 OSBPL8Q9BZF1 889 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 TMEM245Q9H330 911 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 RAD18Q9NS91 495 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 TMCO1Q9UM00 188 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 TTLL13PA6NNM8 815 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 PDGFRBP09619 1106 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 CAP2P40123 477 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 STX5Q13190 355 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 EIF3LQ9Y262 564 aaKnown RBP12.73□□□□□ -0.37
FN1-202ENST00000336916 VPS26AO75436 327 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 MAP3K7CLP57077 242 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 EPHA10Q5JZY3 1008 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 C6orf10Q5SRN2 563 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 ZCCHC8Q6NZY4 707 aaKnown RBP12.73□□□□□ -0.37
FN1-202ENST00000336916 ABI2Q9NYB9 513 aaPredicted RBP12.73□□□□□ -0.37
FN1-202ENST00000336916 TNS2Q63HR2 1409 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 PPP2R1BP30154 601 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 SREBF1P36956 1147 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 RGS9BPQ6ZS82 235 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 B4GALNT2Q8NHY0 566 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 CLPBQ9H078 707 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 TASP1Q9H6P5 420 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 PYCARDQ9ULZ3 195 aa12.73□□□□□ -0.37
FN1-202ENST00000336916 DEAF1O75398 565 aaPredicted RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 IMPDH2P12268 514 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 TCF7P36402 384 aaPredicted RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 DAB2IPQ5VWQ8 1189 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 C3orf62Q6ZUJ4 267 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 CEP70Q8NHQ1 597 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 MAF1Q9H063 256 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 FBXO2Q9UK22 296 aaPredicted RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 FAM170AA1A519 330 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 LZTS3O60299 673 aaPredicted RBP12.72□□□□□ -0.37
FN1-202ENST00000336916 HLA-DRAP01903 254 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 AMHP03971 560 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 KCNK10P57789 538 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 CYP4Z1Q86W10 505 aa12.72□□□□□ -0.37
FN1-202ENST00000336916 MAGEB10Q96LZ2 347 aaPredicted RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 119.7 ms