RNA–Protein interactions for RNA: ENST00000336824.8

FNDC3B-201, Transcript of fibronectin type III domain containing 3B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene FNDC3B, Length 7,904 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FNDC3B-201ENST00000336824 GTF2IRD1Q9UHL9 959 aa9.75□□□□□ -0.85
FNDC3B-201ENST00000336824 MID2Q9UJV3 735 aa9.75□□□□□ -0.85
FNDC3B-201ENST00000336824 MRFAP1Q9Y605 127 aa9.75□□□□□ -0.85
FNDC3B-201ENST00000336824 C11orf97A0A1B0GVM6 126 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 KCNN4O15554 427 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ZNF862O60290 1169 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 HMBSP08397 361 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ETFBP38117 255 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 SLC7A5Q01650 507 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 POU5F1Q01860 360 aaKnown RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ZACNQ401N2 412 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 C18orf25Q96B23 403 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 VPS39Q96JC1 886 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 NUDCD1Q96RS6 583 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 BFARQ9NZS9 450 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 F5H5T6 163 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 EOMESO95936 686 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 CKMP06732 381 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 IRF1P10914 325 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 DNAJB2P25686 324 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 TKTL1P51854 596 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ACAP1Q15027 740 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 PREPLQ4J6C6 727 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 MAMDC4Q6UXC1 1216 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 FAM43BQ6ZT52 329 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 PADI3Q9ULW8 664 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 SMAPO00193 183 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 PNMA6AP0CW24 399 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 SAT1P21673 171 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 PAPOLAP51003 745 aaKnown RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 COPS2P61201 443 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ADCY2Q08462 1091 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 CCDC15Q0P6D6 951 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 USP41Q3LFD5 358 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 SLFN11Q7Z7L1 901 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 GLIS3Q8NEA6 775 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 USP20Q9Y2K6 914 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 SLC4A7Q9Y6M7 1214 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ADRB2P07550 413 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 CCL5P13501 91 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 CENPCQ03188 943 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 PPP3CAQ08209 521 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ORC1Q13415 861 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 PABPC1LQ4VXU2 614 aaKnown RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 IL31Q6EBC2 164 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 RIN2Q8WYP3 895 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 USP13Q92995 863 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 EMID1Q96A84 441 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ATMINO43313 823 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 GJB1P08034 283 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 GTF2F1P35269 517 aaKnown RBP eCLIP9.74□□□□□ -0.852e-7■■■■□ 21.8
FNDC3B-201ENST00000336824 AMPD2Q01433 879 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 TFDP3Q5H9I0 405 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ZC3H18Q86VM9 953 aaKnown RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 FAM71BQ8TC56 605 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 SPATA18Q8TC71 538 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 TARSL2A2RTX5 802 aaKnown RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 CYP3A5P20815 502 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ARSEP51690 589 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 CCDC121Q6ZUS5 278 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 PID1Q7Z2X4 250 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 SPATA4Q8NEY3 305 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 EVPLQ92817 2033 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 KCNF1Q9H3M0 494 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 ARVCFO00192 962 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 PLEKP08567 350 aaPredicted RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 MBTD1Q05BQ5 628 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 TUSC3Q13454 348 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 SDE2Q6IQ49 451 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 TRIM56Q9BRZ2 755 aaKnown RBP9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 C11orf49Q9H6J7 331 aa9.74□□□□□ -0.85
FNDC3B-201ENST00000336824 CCDC85CA6NKD9 419 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 TISP43B9A030 160 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 TLL1O43897 1013 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 TROVE2P10155 538 aaKnown RBP eCLIP9.73□□□□□ -0.854e-12■□□□□ 8.9
FNDC3B-201ENST00000336824 MBL2P11226 248 aaPredicted RBP9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 C6orf118Q5T5N4 469 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 ZNF571Q7Z3V5 609 aaPredicted RBP9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 ARHGEF19Q8IW93 802 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 TOP6BLQ8N6T0 577 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.73□□□□□ -0.851e-10■■■■■ 44
FNDC3B-201ENST00000336824 FRMD3A2A2Y4 597 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 TGFB1I1O43294 461 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 TSPAN1O60635 241 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 YWHAQP27348 245 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 ADIGQ0VDE8 80 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 BYSLQ13895 437 aaKnown RBP9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 ASIC4Q96FT7 647 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 USP18Q9UMW8 372 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 PTPN1P18031 435 aaKnown RBP9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 ZNF135P52742 658 aaPredicted RBP9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 GJA9P57773 515 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 ZNF177Q13360 481 aaPredicted RBP9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 CDH18Q13634 790 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 GDAP1Q8TB36 358 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 TRAIPQ9BWF2 469 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 FAM129AQ9BZQ8 928 aa9.73□□□□□ -0.85
FNDC3B-201ENST00000336824 FOXP3Q9BZS1 431 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms