RNA–Protein interactions for RNA: ENST00000336648.8

HLCS-201, Transcript of holocarboxylase synthetase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HLCS, Length 6,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLCS-201ENST00000336648 SPATA2Q9UM82 520 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.57□□□□□ -0.24
HLCS-201ENST00000336648 SNPHO15079 494 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 SERPINB8P50452 374 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 ATAD3BQ5T9A4 648 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 LMBRD2Q68DH5 695 aaPredicted RBP13.57□□□□□ -0.24
HLCS-201ENST00000336648 TIGD7Q6NT04 549 aaPredicted RBP13.57□□□□□ -0.24
HLCS-201ENST00000336648 ZNF544Q6NX49 715 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 BARGINQ6ZT62 677 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 ZNF512Q96ME7 567 aaPredicted RBP13.57□□□□□ -0.24
HLCS-201ENST00000336648 MXRA8Q9BRK3 442 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 SPRTNQ9H040 489 aaPredicted RBP13.57□□□□□ -0.24
HLCS-201ENST00000336648 EFCAB1Q9HAE3 211 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 TRMT6Q9UJA5 497 aaKnown RBP13.57□□□□□ -0.24
HLCS-201ENST00000336648 HPS5Q9UPZ3 1129 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 PBRM1Q86U86 1689 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 MYMKA6NI61 221 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 KBTBD13C9JR72 458 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 ASNA1O43681 348 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 F9P00740 461 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 KRT6AP02538 564 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 KRT6BP04259 564 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 TPP2P29144 1249 aaPredicted RBP13.57□□□□□ -0.24
HLCS-201ENST00000336648 KRT6CP48668 564 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 CRYMQ14894 314 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 UNC45BQ8IWX7 931 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 TC2NQ8N9U0 490 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 RIN3Q8TB24 985 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 FHDC1Q9C0D6 1143 aaPredicted RBP13.57□□□□□ -0.24
HLCS-201ENST00000336648 DOLKQ9UPQ8 538 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 RAD54BQ9Y620 910 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 ADGRA3Q8IWK6 1321 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 SAC3D1A6NKF1 404 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 RGS5O15539 181 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 PRLRP16471 622 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 RRM2P31350 389 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 CCDC60Q8IWA6 550 aaPredicted RBP13.57□□□□□ -0.24
HLCS-201ENST00000336648 USP33Q8TEY7 942 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 ZNF669Q96BR6 464 aaPredicted RBP13.57□□□□□ -0.24
HLCS-201ENST00000336648 ZNF518BQ9C0D4 1074 aa13.57□□□□□ -0.24
HLCS-201ENST00000336648 DRG1Q9Y295 367 aaKnown RBP13.57□□□□□ -0.24
HLCS-201ENST00000336648 TBKBP1A7MCY6 615 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 ARHGAP15Q53QZ3 475 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 ACAD10Q6JQN1 1059 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 GPAT2Q6NUI2 795 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 NOTUMQ6P988 496 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 C16orf86Q6ZW13 317 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 SH2D3CQ8N5H7 860 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 C19orf18Q8NEA5 215 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 ZIM3Q96PE6 472 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 ERAP1Q9NZ08 941 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 MARCOQ9UEW3 520 aaPredicted RBP13.56□□□□□ -0.24
HLCS-201ENST00000336648 CRLS1Q9UJA2 301 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 FAM196BA6NMK8 535 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 C2orf81A6NN90 581 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 CAND2O75155 1236 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 RPS6KA5O75582 802 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 FAM200BP0CF97 657 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 ALOX15P16050 662 aaPredicted RBP13.56□□□□□ -0.24
HLCS-201ENST00000336648 IRAK1P51617 712 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 FMR1Q06787 632 aaKnown RBP eCLIP13.56□□□□□ -0.244e-9■■■□□ 18
HLCS-201ENST00000336648 PKN2Q16513 984 aaKnown RBP13.56□□□□□ -0.24
HLCS-201ENST00000336648 SLC13A5Q86YT5 568 aaPredicted RBP13.56□□□□□ -0.24
HLCS-201ENST00000336648 IPMKQ8NFU5 416 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 IGDCC4Q8TDY8 1250 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 UBQLN1Q9UMX0 589 aaKnown RBP13.56□□□□□ -0.24
HLCS-201ENST00000336648 MED14O60244 1454 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 STX7O15400 261 aaKnown RBP13.56□□□□□ -0.24
HLCS-201ENST00000336648 TAF6P49848 677 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.56□□□□□ -0.24
HLCS-201ENST00000336648 DAGLBQ8NCG7 672 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 TMEM143Q96AN5 459 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 GPRASP2Q96D09 838 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 ZBTB10Q96DT7 871 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 POLD4Q9HCU8 107 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 WHRNQ9P202 907 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 ZNRF3Q9ULT6 936 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 NDUFB10O96000 172 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 CHRM3P20309 590 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 KRT20P35900 424 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 IL12RB1P42701 662 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 PRIM2P49643 509 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 HMGCS2P54868 508 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 PRKCEQ02156 737 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 CACNB2Q08289 660 aaPredicted RBP13.56□□□□□ -0.24
HLCS-201ENST00000336648 BAATQ14032 418 aaPredicted RBP13.56□□□□□ -0.24
HLCS-201ENST00000336648 GOLGA7BQ2TAP0 167 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 FAM45BPQ6NSW5 357 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 CYP4Z1Q86W10 505 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 ANKRD7Q92527 254 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 JADE3Q92613 823 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 MAGEB18Q96M61 343 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 PABPC3Q9H361 631 aaKnown RBP13.56□□□□□ -0.24
HLCS-201ENST00000336648 VCPKMTQ9H867 229 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 TMEM51Q9NW97 253 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 WWOXQ9NZC7 414 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 NPHP3-ACAD11A0A0J9YXS1 232 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 SOAT1P35610 550 aa13.56□□□□□ -0.24
HLCS-201ENST00000336648 FXR1P51114 621 aaKnown RBP eCLIP13.56□□□□□ -0.24
HLCS-201ENST00000336648 CINPQ9BW66 212 aaPredicted RBP13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms