RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 MUTYHQ9UIF7 546 aa16.78■□□□□ 0.28
MRPL55-202ENST00000336300 SORCS3Q9UPU3 1222 aa16.78■□□□□ 0.28
MRPL55-202ENST00000336300 A0A1W2PRU2 124 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 SLC38A8A6NNN8 435 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 F8VP50 259 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 CLDN5O00501 218 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 AP1G2O75843 785 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 NOL4O94818 638 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 FAM200BP0CF97 657 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 CEBPBP17676 345 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 SLC8A3P57103 927 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 MTMR3Q13615 1198 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 SDHAF4Q5VUM1 108 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 RRAGAQ7L523 313 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 FAM35AQ86V20 835 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 C12orf29Q8N999 325 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 LMO3Q8TAP4 145 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 WHAMMQ8TF30 809 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 JAKMIP2Q96AA8 810 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 TRMT2BQ96GJ1 504 aaKnown RBP16.77■□□□□ 0.28
MRPL55-202ENST00000336300 HNRNPABQ99729 332 aaKnown RBP16.77■□□□□ 0.28
MRPL55-202ENST00000336300 ARID3AQ99856 593 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 CRACR2AQ9BSW2 395 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 LRRC3Q9BY71 257 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 KCNK12Q9HB15 430 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 DMAP1Q9NPF5 467 aaPredicted RBP16.77■□□□□ 0.28
MRPL55-202ENST00000336300 FAM49BQ9NUQ9 324 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 FANCLQ9NW38 375 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 KIAA1257Q9ULG3 409 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 PCDHB4Q9Y5E5 795 aa16.77■□□□□ 0.28
MRPL55-202ENST00000336300 TTC28Q96AY4 2481 aa16.77■□□□□ 0.27
MRPL55-202ENST00000336300 NCOR1O75376 2440 aa16.77■□□□□ 0.27
MRPL55-202ENST00000336300 SYCE3A1L190 88 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 BECN2A8MW95 431 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 CCDC130P13994 396 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 ADORA2BP29275 332 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 CCR2P41597 374 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 MFAP3P55082 362 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 TDGQ13569 410 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 TEAD2Q15562 447 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 PTPN21Q16825 1174 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 UBALD2Q8IYN6 164 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 FUKQ8N0W3 1084 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 SHKBP1Q8TBC3 707 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 MRPS31Q92665 395 aaKnown RBP16.76■□□□□ 0.27
MRPL55-202ENST00000336300 MYRFLQ96LU7 910 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 TWNKQ96RR1 684 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 BPIFA3Q9BQP9 254 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 UBE2TQ9NPD8 197 aaPredicted RBP16.76■□□□□ 0.27
MRPL55-202ENST00000336300 KRT82Q9NSB4 513 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 MUC3AQ02505 3323 aa16.76■□□□□ 0.27
MRPL55-202ENST00000336300 SOBPA7XYQ1 873 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 PI4K2BG5E9Z4 385 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 RTN3O95197 1032 aaPredicted RBP16.75■□□□□ 0.27
MRPL55-202ENST00000336300 CAVIN2O95810 425 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 ASGR2P07307 311 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 HMGA1P17096 107 aaKnown RBP16.75■□□□□ 0.27
MRPL55-202ENST00000336300 GJA1P17302 382 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 DDX6P26196 483 aaKnown RBP eCLIP16.75■□□□□ 0.27
MRPL55-202ENST00000336300 PPP3CCP48454 512 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 ZNF165P49910 485 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 RAD23BP54727 409 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 SGO2Q562F6 1265 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 CDKAL1Q5VV42 579 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 TRIM65Q6PJ69 517 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 TMEM270Q6UE05 265 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 GAREM2Q75VX8 874 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 NUP93Q8N1F7 819 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 SLC4A11Q8NBS3 891 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 ZFP14Q9HCL3 533 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 ZNF334Q9HCZ1 680 aaPredicted RBP16.75■□□□□ 0.27
MRPL55-202ENST00000336300 COMMD8Q9NX08 183 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 APEX2Q9UBZ4 518 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 DENND4AQ7Z401 1863 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 BDP1A6H8Y1 2624 aa16.75■□□□□ 0.27
MRPL55-202ENST00000336300 ANHXE9PGG2 379 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 MOSPD3O75425 235 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 PAEPP09466 180 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 VDRP11473 427 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 CD19P15391 556 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 SLC9A1P19634 815 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 PON1P27169 355 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 MAP3K7CLP57077 242 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 TPM4P67936 248 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 FKBP15Q5T1M5 1219 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 GPR158Q5T848 1215 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 PPP1R26Q5T8A7 1209 aaPredicted RBP16.74■□□□□ 0.27
MRPL55-202ENST00000336300 PHLDB3Q6NSJ2 640 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 PAQR9Q6ZVX9 377 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 AOPEPQ8N6M6 819 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 SMARCD2Q92925 531 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 E2F7Q96AV8 911 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 SLITRK1Q96PX8 696 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 KCNK16Q96T55 309 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 VPS16Q9H269 839 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 TASP1Q9H6P5 420 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 TRPM5Q9NZQ8 1165 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 HESX1Q9UBX0 185 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 NUMBLQ9Y6R0 609 aa16.74■□□□□ 0.27
MRPL55-202ENST00000336300 DPYSL4O14531 572 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms