RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 A0A087WZ62 844 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 ALOX15BO15296 676 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 CILPO75339 1184 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 RNF8O76064 485 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 INSRRP14616 1297 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 GTF2A1P52655 376 aaPredicted RBP18.58■□□□□ 0.57
LRCH3-201ENST00000334859 TAF5Q15542 800 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 PKN2Q16513 984 aaKnown RBP18.58■□□□□ 0.57
LRCH3-201ENST00000334859 FAM102AQ5T9C2 384 aaPredicted RBP18.58■□□□□ 0.57
LRCH3-201ENST00000334859 ANKRD22Q5VYY1 191 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 FAM47EQ6ZV65 393 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 PCGF5Q86SE9 256 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 PPIL6Q8IXY8 311 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 ANKRD13AQ8IZ07 590 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 C4orf33Q8N1A6 199 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 TMEM176AQ96HP8 235 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 FDXACB1Q9BRP7 624 aaPredicted RBP18.58■□□□□ 0.57
LRCH3-201ENST00000334859 WDR3Q9UNX4 943 aaKnown RBP eCLIP18.58■□□□□ 0.57
LRCH3-201ENST00000334859 ARL2BPQ9Y2Y0 163 aa18.58■□□□□ 0.57
LRCH3-201ENST00000334859 SPDYE5A6NIY4 337 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 P4HA1P13674 534 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 MIPP30301 263 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 MTM1Q13496 603 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 SNCBQ16143 134 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 TDRPQ86YL5 185 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 CCDC63Q8NA47 563 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 HEXIM2Q96MH2 286 aaKnown RBP18.58■□□□□ 0.56
LRCH3-201ENST00000334859 SMC6Q96SB8 1091 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 ADPGKQ9BRR6 497 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 PDZD7Q9H5P4 517 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 CD248Q9HCU0 757 aa18.58■□□□□ 0.56
LRCH3-201ENST00000334859 FARP1Q9Y4F1 1045 aaPredicted RBP18.58■□□□□ 0.56
LRCH3-201ENST00000334859 PIK3R2O00459 728 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 HGSO14964 777 aaPredicted RBP18.57■□□□□ 0.56
LRCH3-201ENST00000334859 MCF2P10911 925 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 WDR4P57081 412 aaKnown RBP18.57■□□□□ 0.56
LRCH3-201ENST00000334859 ZNF268Q14587 947 aaPredicted RBP18.57■□□□□ 0.56
LRCH3-201ENST00000334859 UBA3Q8TBC4 463 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 CPT1BQ92523 772 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 HPDLQ96IR7 371 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 NFKBIZQ9BYH8 718 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 FRMD8P1Q9BZ68 369 aaPredicted RBP18.57■□□□□ 0.56
LRCH3-201ENST00000334859 UBN1Q9NPG3 1134 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 PSMC3IPQ9P2W1 217 aaPredicted RBP18.57■□□□□ 0.56
LRCH3-201ENST00000334859 DICER1Q9UPY3 1922 aaKnown RBP18.57■□□□□ 0.56
LRCH3-201ENST00000334859 VTNP04004 478 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 TAC1P20366 129 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 FOXN2P32314 431 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 ARL4CP56559 192 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 TNFAIP2Q03169 654 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 FAM71DQ8N9W8 422 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 PYROXD1Q8WU10 500 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 USP18Q9UMW8 372 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 AGAP1Q9UPQ3 857 aa18.57■□□□□ 0.56
LRCH3-201ENST00000334859 MCF2LO15068 1137 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 OSBPP22059 807 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 RPL22P35268 128 aaKnown RBP18.56■□□□□ 0.56
LRCH3-201ENST00000334859 GSCP56915 257 aaPredicted RBP18.56■□□□□ 0.56
LRCH3-201ENST00000334859 EIF3EP60228 445 aaKnown RBP18.56■□□□□ 0.56
LRCH3-201ENST00000334859 TMEM132DQ14C87 1099 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 MTFR1Q15390 333 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 CGB2Q6NT52 195 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 ATP11CQ8NB49 1132 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 PLCD4Q9BRC7 762 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 MROH8Q9H579 483 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 LGALS2P05162 132 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 ZNF286BP0CG31 522 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 CA4P22748 312 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 ATICP31939 592 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 EFTUD2Q15029 972 aaKnown RBP eCLIP18.56■□□□□ 0.56
LRCH3-201ENST00000334859 TAZQ16635 292 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 AMHR2Q16671 573 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 CCDC142Q17RM4 750 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 ZNF484Q5JVG2 852 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 FNBP1LQ5T0N5 605 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 ARMCX2Q7L311 632 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 UNC45BQ8IWX7 931 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 OPTNQ96CV9 577 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 PITPNM3Q9BZ71 974 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 CYP3A43Q9HB55 503 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 STAU2Q9NUL3 570 aaKnown RBP eCLIP18.56■□□□□ 0.56
LRCH3-201ENST00000334859 SENP1Q9P0U3 644 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 KLHL14Q9P2G3 628 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 KCNH4Q9UQ05 1017 aa18.56■□□□□ 0.56
LRCH3-201ENST00000334859 CLUHO75153 1309 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 APOC4-APOC2K7ER74 178 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 APOC2P02655 101 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 HMGCRP04035 888 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 ARF4P18085 180 aaPredicted RBP18.55■□□□□ 0.56
LRCH3-201ENST00000334859 SSTR1P30872 391 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 PHBP35232 272 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 GPX6P59796 221 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 BASP1P80723 227 aaKnown RBP18.55■□□□□ 0.56
LRCH3-201ENST00000334859 ARHGAP1Q07960 439 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 PPIL2Q13356 520 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 SPARCL1Q14515 664 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 MSS51Q4VC12 460 aa18.55■□□□□ 0.56
LRCH3-201ENST00000334859 TBC1D1Q86TI0 1168 aaPredicted RBP18.55■□□□□ 0.56
LRCH3-201ENST00000334859 GBP7Q8N8V2 638 aaPredicted RBP18.55■□□□□ 0.56
LRCH3-201ENST00000334859 CXorf38Q8TB03 319 aa18.55■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms