RNA–Protein interactions for RNA: ENST00000334504.11

COL4A6-201, Transcript of collagen type IV alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL4A6, Length 6,700 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-201ENST00000334504 EZH2Q15910 746 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 ADCK2Q7Z695 626 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 KRT77Q7Z794 578 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 TRIM9Q9C026 710 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 EIF3LQ9Y262 564 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 MROH7Q68CQ1 1323 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 CFAP43Q8NDM7 1665 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 DPYSL4O14531 572 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 IDH3BO43837 385 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 CST8O60676 142 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 FCGR1AP12314 374 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 ITGAXP20702 1163 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 QARSP47897 775 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 PRIM2P49643 509 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 STK4Q13043 487 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 MAPK7Q13164 816 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 RGS21Q2M5E4 152 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 USP39Q53GS9 565 aaKnown RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 SWSAP1Q6NVH7 229 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 UTS2BQ765I0 119 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 LRRC71Q8N4P6 559 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 RAB42Q8N4Z0 105 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 FBXO36Q8NEA4 188 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 CCSER1Q9C0I3 900 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 ANKZF1Q9H8Y5 726 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 GABBR1Q9UBS5 961 aa10.17□□□□□ -0.78
COL4A6-201ENST00000334504 PNMA8BQ9ULN7 279 aaPredicted RBP10.17□□□□□ -0.78
COL4A6-201ENST00000334504 ZNF682O95780 498 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 APOA4P06727 396 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 AP3M2P53677 418 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 ERVK-24P63145 666 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 CSNK2BP67870 215 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 HPCAP84074 193 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 PCNX4Q63HM2 1172 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 MAGED4Q96JG8 741 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 CHID1Q9BWS9 393 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 TBC1D22BQ9NU19 505 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 DKK3Q9UBP4 350 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 PTCH1Q13635 1447 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 CCDC130P13994 396 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 MAGEA10P43363 369 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 ALDH5A1P51649 535 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 AKR1D1P51857 326 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 NFX1Q12986 1120 aaKnown RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 USPL1Q5W0Q7 1092 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 HAUS6Q7Z4H7 955 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 PGBD3Q8N328 593 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 SVOPQ8N4V2 548 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 VPS37AQ8NEZ2 397 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 ACSF2Q96CM8 615 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 GORASP1Q9BQQ3 440 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 POLR1BQ9H9Y6 1135 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 ATP6V1HQ9UI12 483 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 TUBE1Q9UJT0 475 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 R3HDM2Q9Y2K5 976 aaKnown RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 MAST1Q9Y2H9 1570 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 BTN3A3O00478 584 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 TNPO2O14787 897 aaKnown RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 DUOXA2Q1HG44 320 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 SHROOM1Q2M3G4 852 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 PREPLQ4J6C6 727 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 SLC13A5Q86YT5 568 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 TTC39CQ8N584 583 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 TDRD5Q8NAT2 981 aaKnown RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 IPMKQ8NFU5 416 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 MYLK2Q9H1R3 596 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 CD209Q9NNX6 404 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 HMG20AQ9NP66 347 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 GCC2Q8IWJ2 1684 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 RAD51BO15315 384 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 PLEKP08567 350 aaPredicted RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 KRT20P35900 424 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 FNTAP49354 379 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 NR1D2Q14995 579 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 DDR2Q16832 855 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 ALFQ53S48 1182 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 ATAD3BQ5T9A4 648 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 SEL1L3Q68CR1 1132 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 FAM167AQ96KS9 214 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 C7orf25Q9BPX7 421 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 C1orf50Q9BV19 199 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 GTF2A1LQ9UNN4 478 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 CLOCKO15516 846 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 RHOBTB3O94955 611 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 FASP25445 335 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 NCKAP1LP55160 1127 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 C2orf69Q8N8R5 385 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 ATG16L2Q8NAA4 619 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 WDR36Q8NI36 951 aaKnown RBP10.16□□□□□ -0.78
COL4A6-201ENST00000334504 FAR2Q96K12 515 aa10.16□□□□□ -0.78
COL4A6-201ENST00000334504 GJA8P48165 433 aa10.15□□□□□ -0.78
COL4A6-201ENST00000334504 FASTKD5Q7L8L6 764 aaKnown RBP10.15□□□□□ -0.78
COL4A6-201ENST00000334504 OR6Y1Q8NGX8 325 aa10.15□□□□□ -0.78
COL4A6-201ENST00000334504 PACSIN1Q9BY11 444 aa10.15□□□□□ -0.78
COL4A6-201ENST00000334504 ENTPD7Q9NQZ7 604 aa10.15□□□□□ -0.78
COL4A6-201ENST00000334504 IARS2Q9NSE4 1012 aaKnown RBP10.15□□□□□ -0.78
COL4A6-201ENST00000334504 TUBGCP4Q9UGJ1 667 aa10.15□□□□□ -0.78
COL4A6-201ENST00000334504 MROH7-TTC4A0A0A0MT08 1334 aa10.15□□□□□ -0.78
COL4A6-201ENST00000334504 SUPT7LO94864 414 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms