RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 RARRES1P49788 294 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 STAT2P52630 851 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 BPIFB4P59827 614 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 PTP4A2Q12974 167 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 BRDTQ58F21 947 aaPredicted RBP14.38□□□□□ -0.11
SYNE3-201ENST00000334258 DALRD3Q5D0E6 543 aaKnown RBP14.38□□□□□ -0.11
SYNE3-201ENST00000334258 DCUN1D2Q6PH85 259 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 RIPOR1Q6ZS17 1223 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 ALKBH8Q96BT7 664 aaKnown RBP14.38□□□□□ -0.11
SYNE3-201ENST00000334258 NR1H4Q96RI1 486 aaPredicted RBP14.38□□□□□ -0.11
SYNE3-201ENST00000334258 UBE2OQ9C0C9 1292 aaKnown RBP14.38□□□□□ -0.11
SYNE3-201ENST00000334258 SERPINA10Q9UK55 444 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 SHOC2Q9UQ13 582 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 COL4A5P29400 1685 aa14.38□□□□□ -0.11
SYNE3-201ENST00000334258 CLUHO75153 1309 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 DENND3A2RUS2 1198 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 INHBAP08476 426 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 RTP1P59025 263 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 XKR9Q5GH70 373 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 SYCP2LQ5T4T6 812 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 TMEM270Q6UE05 265 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 ST13P4Q8IZP2 240 aaPredicted RBP14.37□□□□□ -0.11
SYNE3-201ENST00000334258 BANPQ8N9N5 519 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 SKA1Q96BD8 255 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 MTBPQ96DY7 904 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 FAM213AQ9BRX8 229 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 PCDHB4Q9Y5E5 795 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 WNT10BO00744 389 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 DLDP09622 509 aaKnown RBP14.37□□□□□ -0.11
SYNE3-201ENST00000334258 VCPP55072 806 aaKnown RBP14.37□□□□□ -0.11
SYNE3-201ENST00000334258 RPL7AP62424 266 aaKnown RBP14.37□□□□□ -0.11
SYNE3-201ENST00000334258 GTF2BQ00403 316 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 SPOPLQ6IQ16 392 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 RASSF3Q86WH2 238 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 TMPRSS6Q8IU80 811 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 CTAGE3PQ8IX95 158 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 RBM15BQ8NDT2 890 aaKnown RBP14.37□□□□□ -0.11
SYNE3-201ENST00000334258 FBXO27Q8NI29 283 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 OPTNQ96CV9 577 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 GMCL1Q96IK5 515 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 ECSITQ9BQ95 431 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 HOMER2Q9NSB8 354 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 SPECC1L-ADORA2AF8WAN1 911 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 TXNDC9O14530 226 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 KRT72Q14CN4 511 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 FNBP1LQ5T0N5 605 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 ARID3BQ8IVW6 561 aaPredicted RBP14.37□□□□□ -0.11
SYNE3-201ENST00000334258 PDIK1LQ8N165 341 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 RSAD2Q8WXG1 361 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 SLITRK1Q96PX8 696 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 SPATA16Q9BXB7 569 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 KCNK13Q9HB14 408 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 TBX20Q9UMR3 447 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 CHMP2BQ9UQN3 213 aa14.37□□□□□ -0.11
SYNE3-201ENST00000334258 CCDC195A0A1B0GUA6 201 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 HNRNPDLO14979 420 aaKnown RBP14.36□□□□□ -0.11
SYNE3-201ENST00000334258 BASP1P80723 227 aaKnown RBP14.36□□□□□ -0.11
SYNE3-201ENST00000334258 TMPRSS15P98073 1019 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 PTK7Q13308 1070 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 MSS51Q4VC12 460 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 LIN52Q52LA3 116 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 ANKRD22Q5VYY1 191 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 ADGRD1Q6QNK2 874 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 MON1BQ7L1V2 547 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 ENOSF1Q7L5Y1 443 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 RBM12BQ8IXT5 1001 aaKnown RBP14.36□□□□□ -0.11
SYNE3-201ENST00000334258 FEZF2Q8TBJ5 459 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 SENP7Q9BQF6 1050 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 COQ4Q9Y3A0 265 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 SCINQ9Y6U3 715 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 IQANK1A0A1B0GTG1 560 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 YWHABP31946 246 aaKnown RBP14.36□□□□□ -0.11
SYNE3-201ENST00000334258 QARSP47897 775 aaKnown RBP14.36□□□□□ -0.11
SYNE3-201ENST00000334258 ALDH18A1P54886 795 aaKnown RBP14.36□□□□□ -0.11
SYNE3-201ENST00000334258 YWHAGP61981 247 aaKnown RBP eCLIP14.36□□□□□ -0.11
SYNE3-201ENST00000334258 SPOCD1Q6ZMY3 1216 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 SESTD1Q86VW0 696 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 CPXCR1Q8N123 301 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 ACSS3Q9H6R3 686 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 SMYD3Q9H7B4 428 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 SSU72Q9NP77 194 aaKnown RBP14.36□□□□□ -0.11
SYNE3-201ENST00000334258 IP6K2Q9UHH9 426 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 CDK5RAP2Q96SN8 1893 aa14.36□□□□□ -0.11
SYNE3-201ENST00000334258 PMM2O15305 246 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 DNAJC6O75061 913 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 GNA15P30679 374 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 GCNT1Q02742 428 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 PLA2G4FQ68DD2 849 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 PRPF39Q86UA1 669 aaKnown RBP14.35□□□□□ -0.11
SYNE3-201ENST00000334258 RTKN2Q8IZC4 609 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.35□□□□□ -0.11
SYNE3-201ENST00000334258 ACAP3Q96P50 834 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 PCDH9Q9HC56 1237 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 KMT5AQ9NQR1 393 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 ZNRF3Q9ULT6 936 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 F8VP50 259 aa14.35□□□□□ -0.11
SYNE3-201ENST00000334258 MAPTP10636 758 aaKnown RBP14.35□□□□□ -0.11
SYNE3-201ENST00000334258 DMP1Q13316 513 aaPredicted RBP14.35□□□□□ -0.11
SYNE3-201ENST00000334258 TRMT5Q32P41 509 aaKnown RBP14.35□□□□□ -0.11
SYNE3-201ENST00000334258 ACBD5Q5T8D3 534 aaPredicted RBP14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms