RNA–Protein interactions for RNA: ENST00000333130.3

MRPL40-201, Transcript of mitochondrial ribosomal protein L40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MRPL40, Length 1,387 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL40-201ENST00000333130 RPGRIP1Q96KN7 1286 aa21.78■■□□□ 1.08
MRPL40-201ENST00000333130 HEXIM2Q96MH2 286 aaKnown RBP21.78■■□□□ 1.08
MRPL40-201ENST00000333130 GCNAQ96QF7 691 aa21.78■■□□□ 1.08
MRPL40-201ENST00000333130 LSM14BQ9BX40 385 aaKnown RBP21.78■■□□□ 1.08
MRPL40-201ENST00000333130 UBE2TQ9NPD8 197 aaPredicted RBP21.78■■□□□ 1.08
MRPL40-201ENST00000333130 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.78■■□□□ 1.08
MRPL40-201ENST00000333130 CEP72Q9P209 647 aa21.78■■□□□ 1.08
MRPL40-201ENST00000333130 PCDHB4Q9Y5E5 795 aa21.78■■□□□ 1.08
MRPL40-201ENST00000333130 A0A1W2PQC6 194 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 ATF6P18850 670 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 ACO1P21399 889 aaKnown RBP21.77■■□□□ 1.08
MRPL40-201ENST00000333130 KLK7P49862 253 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 CCDC142Q17RM4 750 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 GJB7Q6PEY0 223 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 SARM1Q6SZW1 724 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 GET4Q7L5D6 327 aaPredicted RBP21.77■■□□□ 1.08
MRPL40-201ENST00000333130 FAM35AQ86V20 835 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 UHRF1Q96T88 793 aaPredicted RBP21.77■■□□□ 1.08
MRPL40-201ENST00000333130 NAA15Q9BXJ9 866 aaKnown RBP21.77■■□□□ 1.08
MRPL40-201ENST00000333130 GANQ9H2C0 597 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 AVENQ9NQS1 362 aaPredicted RBP21.77■■□□□ 1.08
MRPL40-201ENST00000333130 FAM49BQ9NUQ9 324 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 HCFC1R1Q9NWW0 138 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 IFNKQ9P0W0 207 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 DNMT3BQ9UBC3 853 aaKnown RBP21.77■■□□□ 1.08
MRPL40-201ENST00000333130 UXTQ9UBK9 157 aaPredicted RBP21.77■■□□□ 1.08
MRPL40-201ENST00000333130 MRPS23Q9Y3D9 190 aaKnown RBP21.77■■□□□ 1.08
MRPL40-201ENST00000333130 DAAM1Q9Y4D1 1078 aa21.77■■□□□ 1.08
MRPL40-201ENST00000333130 ZFP37Q9Y6Q3 630 aaPredicted RBP21.77■■□□□ 1.08
MRPL40-201ENST00000333130 DOCK8Q8NF50 2099 aa21.77■■□□□ 1.07
MRPL40-201ENST00000333130 NOL4O94818 638 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 GBP2P32456 591 aaPredicted RBP21.76■■□□□ 1.07
MRPL40-201ENST00000333130 SSTR3P32745 418 aaPredicted RBP21.76■■□□□ 1.07
MRPL40-201ENST00000333130 PBX1P40424 430 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 ZP2Q05996 745 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 TMEM270Q6UE05 265 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 PLCD3Q8N3E9 789 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 SLC2A14Q8TDB8 520 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 TWNKQ96RR1 684 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 LPIN3Q9BQK8 851 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 B3GNT5Q9BYG0 378 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 ZNF518BQ9C0D4 1074 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 DMAP1Q9NPF5 467 aaPredicted RBP21.76■■□□□ 1.07
MRPL40-201ENST00000333130 KRT82Q9NSB4 513 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 AJAP1Q9UKB5 411 aaPredicted RBP21.76■■□□□ 1.07
MRPL40-201ENST00000333130 CNTN6Q9UQ52 1028 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 GREB1Q4ZG55 1949 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 NOTCH4Q99466 2003 aa21.76■■□□□ 1.07
MRPL40-201ENST00000333130 AP1G2O75843 785 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 FAM200BP0CF97 657 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 MYL4P12829 197 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 CCDC130P13994 396 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 UCHL3P15374 230 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 RAD23BP54727 409 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 SLC8A3P57103 927 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 DDR2Q16832 855 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 SGO2Q562F6 1265 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 DNAJB7Q7Z6W7 309 aaPredicted RBP21.75■■□□□ 1.07
MRPL40-201ENST00000333130 C12orf29Q8N999 325 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 GIPC2Q8TF65 315 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 CYFIP2Q96F07 1278 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 SPATA17Q96L03 361 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 C8orf48Q96LL4 319 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 FAM207AQ9NSI2 230 aaPredicted RBP21.75■■□□□ 1.07
MRPL40-201ENST00000333130 KIAA1257Q9ULG3 409 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 FHOD1Q9Y613 1164 aa21.75■■□□□ 1.07
MRPL40-201ENST00000333130 ZNF638Q14966 1978 aaKnown RBP21.75■■□□□ 1.07
MRPL40-201ENST00000333130 CLDN5O00501 218 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 EPHB6O15197 1021 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 PAEPP09466 180 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 KRT5P13647 590 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 CD19P15391 556 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 SP100P23497 879 aaPredicted RBP21.74■■□□□ 1.07
MRPL40-201ENST00000333130 ADORA2BP29275 332 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 CDC25CP30307 473 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 EPHA5P54756 1037 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 NTHL1P78549 312 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 FUKQ8N0W3 1084 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 SLC4A11Q8NBS3 891 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 SHC3Q92529 594 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 HNRNPABQ99729 332 aaKnown RBP21.74■■□□□ 1.07
MRPL40-201ENST00000333130 XPO4Q9C0E2 1151 aaKnown RBP21.74■■□□□ 1.07
MRPL40-201ENST00000333130 DNAJC12Q9UKB3 198 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 PATJQ8NI35 1801 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 DENND4CQ5VZ89 1909 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 F8VP50 259 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 MICAL2O94851 1124 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 ZNF132P52740 706 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 ARHGAP15Q53QZ3 475 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 DENND5BQ6ZUT9 1274 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 RBBP8NLQ8NC74 664 aaPredicted RBP21.74■■□□□ 1.07
MRPL40-201ENST00000333130 FEZF2Q8TBJ5 459 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 GPR152Q8TDT2 470 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 PCMTD1Q96MG8 357 aaPredicted RBP21.74■■□□□ 1.07
MRPL40-201ENST00000333130 GPR88Q9GZN0 384 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 HESX1Q9UBX0 185 aa21.74■■□□□ 1.07
MRPL40-201ENST00000333130 MAGED2Q9UNF1 606 aaPredicted RBP21.74■■□□□ 1.07
MRPL40-201ENST00000333130 SLC38A8A6NNN8 435 aa21.73■■□□□ 1.07
MRPL40-201ENST00000333130 AP5Z1O43299 807 aa21.73■■□□□ 1.07
MRPL40-201ENST00000333130 CBFA2T2O43439 604 aa21.73■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms