RNA–Protein interactions for RNA: ENST00000333090.4

TSKU-201, Transcript of tsukushi, small leucine rich proteoglycan, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSKU, Length 2,712 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSKU-201ENST00000333090 OXNAD1Q96HP4 312 aaPredicted RBP24.74■■□□□ 1.55
TSKU-201ENST00000333090 SERAC1Q96JX3 654 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 ZWILCHQ9H900 591 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 XPNPEP1Q9NQW7 623 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 RBAKQ9NYW8 714 aaPredicted RBP24.74■■□□□ 1.55
TSKU-201ENST00000333090 IKBKGQ9Y6K9 419 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 ZNF541Q9H0D2 1346 aa24.74■■□□□ 1.55
TSKU-201ENST00000333090 FAM237BA0A1B0GVD1 139 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 CALB1P05937 261 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 RPL22P35268 128 aaKnown RBP24.73■■□□□ 1.55
TSKU-201ENST00000333090 ROR2Q01974 943 aaKnown RBP24.73■■□□□ 1.55
TSKU-201ENST00000333090 PTK7Q13308 1070 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 ZNF394Q53GI3 561 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 KCNT1Q5JUK3 1230 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 SCARA3Q6AZY7 606 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 CFAP61Q8NHU2 1237 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 RMDN3Q96TC7 470 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 NMUR2Q9GZQ4 415 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 ZNF277Q9NRM2 450 aaPredicted RBP24.73■■□□□ 1.55
TSKU-201ENST00000333090 CPSF2Q9P2I0 782 aaKnown RBP24.73■■□□□ 1.55
TSKU-201ENST00000333090 MAP3K7O43318 606 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 CST8O60676 142 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 AP1B1Q10567 949 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 ZBTB41Q5SVQ8 909 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 CIAPIN1Q6FI81 312 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 PPP1R2P3Q6NXS1 205 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 GALNT15Q8N3T1 639 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 ZBTB45Q96K62 511 aaPredicted RBP24.73■■□□□ 1.55
TSKU-201ENST00000333090 POLR3FQ9H1D9 316 aaPredicted RBP24.73■■□□□ 1.55
TSKU-201ENST00000333090 DDX56Q9NY93 547 aaKnown RBP24.73■■□□□ 1.55
TSKU-201ENST00000333090 ARHGAP28Q9P2N2 729 aa24.73■■□□□ 1.55
TSKU-201ENST00000333090 XPO7Q9UIA9 1087 aaKnown RBP24.73■■□□□ 1.55
TSKU-201ENST00000333090 RARBP10826 455 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 AMPD1P23109 780 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 PTPN7P35236 360 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 BASP1P80723 227 aaKnown RBP24.72■■□□□ 1.55
TSKU-201ENST00000333090 CYP4A22Q5TCH4 519 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 ALYREFQ86V81 257 aaKnown RBP24.72■■□□□ 1.55
TSKU-201ENST00000333090 MFN1Q8IWA4 741 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 FAM161BQ96MY7 647 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 CYTH2Q99418 400 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 SEPT9Q9UHD8 586 aaPredicted RBP24.72■■□□□ 1.55
TSKU-201ENST00000333090 TGDSO95455 350 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 PYGBP11216 843 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 TBXAS1P24557 533 aaPredicted RBP24.72■■□□□ 1.55
TSKU-201ENST00000333090 ETV4P43268 484 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 CACNA2D1P54289 1103 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 KRT72Q14CN4 511 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 OR5B17Q8NGF7 314 aa24.72■■□□□ 1.55
TSKU-201ENST00000333090 MMADHCQ9H3L0 296 aaPredicted RBP24.72■■□□□ 1.55
TSKU-201ENST00000333090 SEC23IPQ9Y6Y8 1000 aaKnown RBP24.72■■□□□ 1.55
TSKU-201ENST00000333090 IQANK1A0A1B0GTG1 560 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 DHRS4L1P0CG22 281 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 BRD2P25440 801 aaKnown RBP24.71■■□□□ 1.55
TSKU-201ENST00000333090 PIGHQ14442 188 aaPredicted RBP24.71■■□□□ 1.55
TSKU-201ENST00000333090 PPP1R15BQ5SWA1 713 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 CHSY1Q86X52 802 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 KBTBD2Q8IY47 623 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 MCPH1Q8NEM0 835 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 APOPT1Q96IL0 206 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 E7ESA3 106 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 H3BRJ5 948 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 DGAT1O75907 488 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 POLE2P56282 527 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 FAAP100Q0VG06 881 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 SYCP2LQ5T4T6 812 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 IFT43Q96FT9 208 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 ZNF184Q99676 751 aaPredicted RBP24.71■■□□□ 1.55
TSKU-201ENST00000333090 PDCD2LQ9BRP1 358 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 KRT82Q9NSB4 513 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 WDR35Q9P2L0 1181 aa24.71■■□□□ 1.55
TSKU-201ENST00000333090 E5RJQ4 531 aa24.7■■□□□ 1.55
TSKU-201ENST00000333090 PLSCR1O15162 318 aa24.7■■□□□ 1.55
TSKU-201ENST00000333090 RAB27AP51159 221 aa24.7■■□□□ 1.55
TSKU-201ENST00000333090 NRLP54845 237 aa24.7■■□□□ 1.55
TSKU-201ENST00000333090 SWSAP1Q6NVH7 229 aa24.7■■□□□ 1.55
TSKU-201ENST00000333090 IGDCC3Q8IVU1 814 aa24.7■■□□□ 1.55
TSKU-201ENST00000333090 HAPLN2Q9GZV7 340 aa24.7■■□□□ 1.55
TSKU-201ENST00000333090 ZNF212Q9UDV6 495 aa24.7■■□□□ 1.55
TSKU-201ENST00000333090 CNTN6Q9UQ52 1028 aa24.7■■□□□ 1.55
TSKU-201ENST00000333090 TELO2Q9Y4R8 837 aa24.7■■□□□ 1.55
TSKU-201ENST00000333090 COL2A1P02458 1487 aaPredicted RBP24.7■■□□□ 1.55
TSKU-201ENST00000333090 TCRBV5S1A1TA0A578 114 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 SPDYE2BA6NHP3 402 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 B2RBV5 119 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 INHBAP08476 426 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 SPDYE6P0CI01 402 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 NEK3P51956 506 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 KBTBD12Q3ZCT8 623 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 SEZ6Q53EL9 994 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 FOXB2Q5VYV0 432 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 UNC45BQ8IWX7 931 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 ARHGAP24Q8N264 748 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 ZNF341Q9BYN7 854 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 NCOA4Q13772 614 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 MDH1BQ5I0G3 518 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 ARHGEF16Q5VV41 709 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 DDX51Q8N8A6 666 aaKnown RBP eCLIP24.7■■□□□ 1.54
TSKU-201ENST00000333090 FAM71DQ8N9W8 422 aa24.7■■□□□ 1.54
TSKU-201ENST00000333090 FAM151AQ8WW52 585 aa24.7■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 33 ms