RNA–Protein interactions for RNA: ENST00000331222.5

CLN8-201, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN8, Length 7,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-201ENST00000331222 GRK2P25098 689 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 SLC11A2P49281 568 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 NR1H3Q13133 447 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 TAAR1Q96RJ0 339 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 FHDC1Q9C0D6 1143 aaPredicted RBP10.96□□□□□ -0.65
CLN8-201ENST00000331222 ADCY10Q96PN6 1610 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 H7C1W4 665 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 CYB561D2O14569 222 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 PSMD3O43242 534 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 USP11P51784 963 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 GALCP54803 685 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 BYSLQ13895 437 aaKnown RBP10.96□□□□□ -0.65
CLN8-201ENST00000331222 GPRASP2Q96D09 838 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 GPATCH2LQ9NWQ4 482 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 NSMCE4AQ9NXX6 385 aa10.96□□□□□ -0.65
CLN8-201ENST00000331222 SUPT7LO94864 414 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 FAM107AO95990 144 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 LTFP02788 710 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 ENOSF1Q7L5Y1 443 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 RDM1Q8NG50 284 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 ROGDIQ9GZN7 287 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 IARS2Q9NSE4 1012 aaKnown RBP10.96□□□□□ -0.66
CLN8-201ENST00000331222 FBXO28Q9NVF7 368 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 IGSF1Q8N6C5 1336 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 CHURC1-FNTBB4DL54 471 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 CFAP99D6REC4 459 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 PSMD12O00232 456 aaPredicted RBP10.96□□□□□ -0.66
CLN8-201ENST00000331222 DLGAP3O95886 979 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 SEMA3FQ13275 785 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 LAMC2Q13753 1193 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 EPHA7Q15375 998 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 CCDC144BQ3MJ40 725 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 TMC2Q8TDI7 906 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 NT5MQ9NPB1 228 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 STX7O15400 261 aaKnown RBP10.96□□□□□ -0.66
CLN8-201ENST00000331222 RUNX1T1Q06455 604 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 MIIPQ5JXC2 388 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 HDDC2Q7Z4H3 204 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 P3H2Q8IVL5 708 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 VPS28Q9UK41 221 aa10.96□□□□□ -0.66
CLN8-201ENST00000331222 NBPF26B4DH59 902 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 DYRK3O43781 588 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 DPEP1P16444 411 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 TARSP26639 723 aaKnown RBP10.95□□□□□ -0.66
CLN8-201ENST00000331222 STIP1P31948 543 aaKnown RBP10.95□□□□□ -0.66
CLN8-201ENST00000331222 CLCN3P51790 818 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 DPYDQ12882 1025 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 TMC7Q7Z402 723 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 SPATA21Q7Z572 469 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 PTAR1Q7Z6K3 402 aaPredicted RBP10.95□□□□□ -0.66
CLN8-201ENST00000331222 CERKQ8TCT0 537 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 WWP1Q9H0M0 922 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 CNTNAP2Q9UHC6 1331 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 CSF1RP07333 972 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 PTGER2P43116 358 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 ACOX1Q15067 660 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 XKR3Q5GH77 459 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 BBS7Q8IWZ6 715 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 DCP1BQ8IZD4 617 aaKnown RBP10.95□□□□□ -0.66
CLN8-201ENST00000331222 OR8H2Q8N162 312 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 ATP6V0D2Q8N8Y2 350 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 ATP6V1G3Q96LB4 118 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 MIR1-1HGQ9H1L0 117 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 FAM96AQ9H5X1 160 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 SHROOM2Q13796 1616 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 NR5A2O00482 541 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 RGL2O15211 777 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 PCSK1P29120 753 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 NOS3P29474 1203 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 CCR4P51679 360 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 MARSP56192 900 aaKnown RBP10.95□□□□□ -0.66
CLN8-201ENST00000331222 SOX10P56693 466 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 SLC44A4Q53GD3 710 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 LINC00116Q8NCU8 138 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 TUBGCP3Q96CW5 907 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 NEUROD4Q9HD90 331 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 PHF2O75151 1096 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 CETPP11597 493 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 FOXO4P98177 505 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 C16orf89Q6UX73 402 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 DNAAF5Q86Y56 855 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 PCYOX1LQ8NBM8 494 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 RIN2Q8WYP3 895 aaPredicted RBP10.95□□□□□ -0.66
CLN8-201ENST00000331222 COLEC11Q9BWP8 271 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 SCN3BQ9NY72 215 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 PTCH1Q13635 1447 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 TBKBP1A7MCY6 615 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 ERI2A8K979 691 aaKnown RBP10.95□□□□□ -0.66
CLN8-201ENST00000331222 STXBP3O00186 592 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 SKIV2L2P42285 1042 aaKnown RBP10.95□□□□□ -0.66
CLN8-201ENST00000331222 HALP42357 657 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 EDEM1Q92611 657 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 TADA1Q96BN2 335 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 ATG4CQ96DT6 458 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.95□□□□□ -0.66
CLN8-201ENST00000331222 PLA2G4CQ9UP65 541 aa10.95□□□□□ -0.66
CLN8-201ENST00000331222 COMTP21964 271 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 CTCFP49711 727 aaPredicted RBP10.94□□□□□ -0.66
CLN8-201ENST00000331222 ITGA8P53708 1063 aa10.94□□□□□ -0.66
CLN8-201ENST00000331222 CTXN3Q4LDR2 81 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms