RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 C7orf26Q96N11 449 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 CCDC106Q9BWC9 280 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 VAV3Q9UKW4 847 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 PCDHA1Q9Y5I3 950 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 PROSCO94903 275 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 GYS1P13807 737 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 IDO1P14902 403 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 GLRA2P23416 452 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 SSTR1P30872 391 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 ZFP28Q8NHY6 868 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 TRIM11Q96F44 468 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 KCNQ5Q9NR82 932 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 CNTN3Q9P232 1028 aa25.43■■□□□ 1.66
SOX1-201ENST00000330949 PDE1BQ01064 536 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 C3orf62Q6ZUJ4 267 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 NLRX1Q86UT6 975 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 FNDC8Q8TC99 324 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 SLX1AQ9BQ83 275 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 LZTS1Q9Y250 596 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 IQANK1A0A1B0GTG1 560 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 E5RJQ4 531 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 CASQ2O14958 399 aaPredicted RBP25.42■■□□□ 1.66
SOX1-201ENST00000330949 ZFXP17010 805 aaPredicted RBP25.42■■□□□ 1.66
SOX1-201ENST00000330949 CDK18Q07002 472 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 TMC7Q7Z402 723 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 SLF2Q8IX21 1173 aa25.42■■□□□ 1.66
SOX1-201ENST00000330949 GADD45GIP1Q8TAE8 222 aaPredicted RBP25.42■■□□□ 1.66
SOX1-201ENST00000330949 BARX2Q9UMQ3 279 aaPredicted RBP25.42■■□□□ 1.66
SOX1-201ENST00000330949 G3V3G9 751 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 DENRO43583 198 aaKnown RBP25.41■■□□□ 1.66
SOX1-201ENST00000330949 CCNT2O60583 730 aaKnown RBP25.41■■□□□ 1.66
SOX1-201ENST00000330949 YY1P25490 414 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 ADRM1Q16186 407 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 DCAF8Q5TAQ9 597 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 TRIM67Q6ZTA4 783 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 MCOLN2Q8IZK6 566 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 DDX1Q92499 740 aaKnown RBP25.41■■□□□ 1.66
SOX1-201ENST00000330949 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP25.41■■□□□ 1.66
SOX1-201ENST00000330949 PMM2O15305 246 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 GRIN3BO60391 1043 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 OATP04181 439 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 CPOXP36551 454 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 FDFT1P37268 417 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 QRICH1Q2TAL8 776 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 CIAPIN1Q6FI81 312 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 BORAQ6PGQ7 559 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 ANO5Q75V66 913 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 HOMEZQ8IX15 550 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 METTL25Q8N6Q8 603 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 ZNF219Q9P2Y4 722 aaPredicted RBP25.41■■□□□ 1.66
SOX1-201ENST00000330949 SHMT1P34896 483 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 HIRAP54198 1017 aaPredicted RBP25.41■■□□□ 1.66
SOX1-201ENST00000330949 SORCS3Q9UPU3 1222 aa25.41■■□□□ 1.66
SOX1-201ENST00000330949 RGL2O15211 777 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 TRMUO75648 421 aaKnown RBP25.4■■□□□ 1.66
SOX1-201ENST00000330949 SERPINA6P08185 405 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 ETS1P14921 441 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 ADRA2BP18089 450 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 NCKAP1LP55160 1127 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 COG7P83436 770 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 GRAMD1BQ3KR37 738 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 PCGF5Q86SE9 256 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 ARID3BQ8IVW6 561 aaPredicted RBP25.4■■□□□ 1.66
SOX1-201ENST00000330949 SIKE1Q9BRV8 207 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 YIPF2Q9BWQ6 316 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 GRIP2Q9C0E4 1043 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 TUFT1Q9NNX1 390 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 PRR5-ARHGAP8B1AHC4 643 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 BIRC5O15392 142 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 MSH4O15457 936 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 BANF1O75531 89 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 CD58P19256 250 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 ARHGAP8P85298 464 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 SLC18A2Q05940 514 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 GABPAQ06546 454 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 KLHL35Q6PF15 583 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 NCCRP1Q6ZVX7 275 aaPredicted RBP25.4■■□□□ 1.66
SOX1-201ENST00000330949 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.4■■□□□ 1.66
SOX1-201ENST00000330949 FAIMQ9NVQ4 179 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 DRG1Q9Y295 367 aaKnown RBP25.4■■□□□ 1.66
SOX1-201ENST00000330949 PPME1Q9Y570 386 aa25.4■■□□□ 1.66
SOX1-201ENST00000330949 FAM86B1E9PN63 330 aa25.39■■□□□ 1.66
SOX1-201ENST00000330949 STK10O94804 968 aaKnown RBP25.39■■□□□ 1.66
SOX1-201ENST00000330949 FAM86B2P0C5J1 330 aa25.39■■□□□ 1.66
SOX1-201ENST00000330949 SERPINB6P35237 376 aa25.39■■□□□ 1.66
SOX1-201ENST00000330949 ALDH18A1P54886 795 aaKnown RBP25.39■■□□□ 1.66
SOX1-201ENST00000330949 HSF5Q4G112 596 aaPredicted RBP25.39■■□□□ 1.66
SOX1-201ENST00000330949 ATG16L1Q676U5 607 aa25.39■■□□□ 1.66
SOX1-201ENST00000330949 DDI1Q8WTU0 396 aa25.39■■□□□ 1.66
SOX1-201ENST00000330949 SLC35B4Q969S0 331 aa25.39■■□□□ 1.66
SOX1-201ENST00000330949 PCIF1Q9H4Z3 704 aa25.39■■□□□ 1.66
SOX1-201ENST00000330949 ARHGEF38Q9NXL2 777 aa25.39■■□□□ 1.66
SOX1-201ENST00000330949 MAD1L1Q9Y6D9 718 aa25.39■■□□□ 1.66
SOX1-201ENST00000330949 GAKO14976 1311 aa25.39■■□□□ 1.65
SOX1-201ENST00000330949 MAGEB3O15480 346 aa25.39■■□□□ 1.65
SOX1-201ENST00000330949 SLITRK3O94933 977 aa25.39■■□□□ 1.65
SOX1-201ENST00000330949 TNFAIP8O95379 198 aa25.39■■□□□ 1.65
SOX1-201ENST00000330949 ZNF200P98182 395 aaPredicted RBP25.39■■□□□ 1.65
SOX1-201ENST00000330949 PPIDQ08752 370 aaKnown RBP25.39■■□□□ 1.65
SOX1-201ENST00000330949 CCNIQ14094 377 aa25.39■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms