RNA–Protein interactions for RNA: ENST00000330503.11

DDX41-201, Transcript of DEAD-box helicase 41, humanhuman

TSL 1 (best)

Gene DDX41, Length 2,137 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-201ENST00000330503 GAD1Q99259 594 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 TRMT13Q9NUP7 481 aaKnown RBP17.86■□□□□ 0.45
DDX41-201ENST00000330503 PTPN22Q9Y2R2 807 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 KRT10P13645 584 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 ACLYP53396 1101 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 GYS2P54840 703 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 GABPB1Q06547 395 aaPredicted RBP17.86■□□□□ 0.45
DDX41-201ENST00000330503 DSC3Q14574 896 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 FAM102AQ5T9C2 384 aaPredicted RBP17.86■□□□□ 0.45
DDX41-201ENST00000330503 SPOCD1Q6ZMY3 1216 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 TMEM110Q86TL2 294 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 KHSRPQ92945 711 aaKnown RBP eCLIP17.86■□□□□ 0.45
DDX41-201ENST00000330503 RBM41Q96IZ5 413 aaKnown RBP17.86■□□□□ 0.45
DDX41-201ENST00000330503 ZIM3Q96PE6 472 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 SNX25Q9H3E2 840 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 CACNG4Q9UBN1 327 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 FAN1Q9Y2M0 1017 aa17.86■□□□□ 0.45
DDX41-201ENST00000330503 C3orf70A6NLC5 250 aaPredicted RBP17.85■□□□□ 0.45
DDX41-201ENST00000330503 SETSIPP0DME0 302 aa17.85■□□□□ 0.45
DDX41-201ENST00000330503 GHRP10912 638 aa17.85■□□□□ 0.45
DDX41-201ENST00000330503 MLH1P40692 756 aa17.85■□□□□ 0.45
DDX41-201ENST00000330503 PDE4CQ08493 712 aa17.85■□□□□ 0.45
DDX41-201ENST00000330503 PTK7Q13308 1070 aa17.85■□□□□ 0.45
DDX41-201ENST00000330503 LPIN1Q14693 890 aa17.85■□□□□ 0.45
DDX41-201ENST00000330503 HSP90B2PQ58FF3 399 aa17.85■□□□□ 0.45
DDX41-201ENST00000330503 RNF180Q86T96 592 aa17.85■□□□□ 0.45
DDX41-201ENST00000330503 IPO4Q8TEX9 1081 aaKnown RBP17.85■□□□□ 0.45
DDX41-201ENST00000330503 SH3GL2Q99962 352 aa17.85■□□□□ 0.45
DDX41-201ENST00000330503 DDX56Q9NY93 547 aaKnown RBP17.85■□□□□ 0.45
DDX41-201ENST00000330503 HUS1O60921 280 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 CCDC130P13994 396 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 WARSP23381 471 aaKnown RBP17.84■□□□□ 0.45
DDX41-201ENST00000330503 UAP1Q16222 522 aaPredicted RBP17.84■□□□□ 0.45
DDX41-201ENST00000330503 CCNG2Q16589 344 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 FAM26DQ5JW98 314 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 POLNQ7Z5Q5 900 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 TOP6BLQ8N6T0 577 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 TSPYL2Q9H2G4 693 aaPredicted RBP17.84■□□□□ 0.45
DDX41-201ENST00000330503 GIT1Q9Y2X7 761 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 ARL5CA6NH57 179 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 C2CD4BA6NLJ0 364 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 CYB561D2O14569 222 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 HSF2BPO75031 334 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 ECEL1O95672 775 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 PTPN7P35236 360 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 ZNF143P52747 638 aaPredicted RBP17.84■□□□□ 0.45
DDX41-201ENST00000330503 COPS2P61201 443 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 TAF5Q15542 800 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 TERF2Q15554 542 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 CFAP58Q5T655 872 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 ADGRF2Q8IZF7 708 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 ANKRD52Q8NB46 1076 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 RAET1EQ8TD07 263 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 PXYLP1Q8TE99 480 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 STK32AQ8WU08 396 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 RXFP2Q8WXD0 754 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 FAM118BQ9BPY3 351 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 TXLNGYQ9BZA5 131 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 ZWILCHQ9H900 591 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 HESX1Q9UBX0 185 aa17.84■□□□□ 0.45
DDX41-201ENST00000330503 ZNF623O75123 536 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 CABYRO75952 493 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 THP07101 528 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 HSD17B3P37058 310 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 CETN2P41208 172 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 CDKN2BP42772 138 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 PLTPP55058 493 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 ACAP1Q15027 740 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 SH3PXD2AQ5TCZ1 1133 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 SCUBE3Q8IX30 993 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 HACE1Q8IYU2 909 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 ATL2Q8NHH9 583 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 TRAIPQ9BWF2 469 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 MIS12Q9H081 205 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 HOMER3Q9NSC5 361 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 VPS18Q9P253 973 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 NEU2Q9Y3R4 380 aa17.83■□□□□ 0.45
DDX41-201ENST00000330503 hCG_1818297A0A087WSY0 165 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 PAPSS1O43252 624 aaPredicted RBP17.83■□□□□ 0.44
DDX41-201ENST00000330503 RNF40O75150 1001 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 ATP2C2O75185 946 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 ADORA2BP29275 332 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 MIPP30301 263 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 RPL34P49207 117 aaKnown RBP17.83■□□□□ 0.44
DDX41-201ENST00000330503 SLC6A3Q01959 620 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 RAB6CQ53S08 254 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 KCNT1Q5JUK3 1230 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 ZFYVE27Q5T4F4 411 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 WSCD1Q658N2 575 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 KAZNQ674X7 775 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 LHX8Q68G74 356 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 OLFML1Q6UWY5 402 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 TMC3Q7Z5M5 1100 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 FBXO25Q8TCJ0 367 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 LRRC45Q96CN5 670 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 RAB6CQ9H0N0 254 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 SLC38A7Q9NVC3 462 aa17.83■□□□□ 0.44
DDX41-201ENST00000330503 LRRD1A4D1F6 860 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 GRAP2O75791 330 aa17.82■□□□□ 0.44
DDX41-201ENST00000330503 TRUB2O95900 331 aaKnown RBP17.82■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms