RNA–Protein interactions for RNA: ENST00000330188.13

TPM3-206, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-206ENST00000330188 CCT8L1PA6NM43 557 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 TSPAN1O60635 241 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 HMGCRP04035 888 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 GHRP10912 638 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 ADORA2AP29274 412 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 MIPP30301 263 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 ADCYAP1R1P41586 468 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 GDF10P55107 478 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 INCA1Q0VD86 236 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 SF3A3Q12874 501 aaKnown RBP eCLIP15.29■□□□□ 0.04
TPM3-206ENST00000330188 TMED2Q15363 201 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 MAP1SQ66K74 1059 aaPredicted RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 GPRC5AQ8NFJ5 357 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 ZC3H15Q8WU90 426 aaKnown RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 EMID1Q96A84 441 aaPredicted RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 HEXIM2Q96MH2 286 aaKnown RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 KATNBL1Q9H079 304 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 C10orf88Q9H8K7 445 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 MLXIPLQ9NP71 852 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 PCSK1NQ9UHG2 260 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 ITGA11Q9UKX5 1188 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 PNMA3Q9UL41 463 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 TCP11X1B4DZS4 312 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 ALOX15BO15296 676 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 TRUB2O95900 331 aaKnown RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 OAS1P00973 400 aaKnown RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 CYP3A5P20815 502 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 ACAP1Q15027 740 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 TAF5Q15542 800 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 HP1BP3Q5SSJ5 553 aaPredicted RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 LDLRAD1Q5T700 205 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 FAM102AQ5T9C2 384 aaPredicted RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 C9orf131Q5VYM1 1079 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 TAX1BP1Q86VP1 789 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 TDRPQ86YL5 185 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 CMASQ8NFW8 434 aaPredicted RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 UBA3Q8TBC4 463 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 GTF3C2Q8WUA4 911 aaPredicted RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 NLRP7Q8WX94 980 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 ADPGKQ9BRR6 497 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 BARX2Q9UMQ3 279 aaPredicted RBP15.29■□□□□ 0.04
TPM3-206ENST00000330188 C2CD2Q9Y426 696 aa15.29■□□□□ 0.04
TPM3-206ENST00000330188 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.28■□□□□ 0.04
TPM3-206ENST00000330188 SNX3O60493 162 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 STAU1O95793 577 aaKnown RBP15.28■□□□□ 0.04
TPM3-206ENST00000330188 EPHX2P34913 555 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 SCTRP47872 440 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 NDST1P52848 882 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 PDE4CQ08493 712 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 CENPUQ71F23 418 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 ZBED8Q8IZ13 594 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 KCTD6Q8NC69 237 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 GDAP1Q8TB36 358 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 ACAP3Q96P50 834 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 CDKN2AIPQ9NXV6 580 aaPredicted RBP15.28■□□□□ 0.04
TPM3-206ENST00000330188 DPP3Q9NY33 737 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 USP18Q9UMW8 372 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 TRIP11Q15643 1979 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 RASA4BC9J798 803 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 RASA4O43374 803 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 RNF8O76064 485 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 CTCFP49711 727 aaPredicted RBP15.28■□□□□ 0.04
TPM3-206ENST00000330188 CCNA1P78396 465 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 RBP5P82980 135 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 PDIA2Q13087 525 aaKnown RBP15.28■□□□□ 0.04
TPM3-206ENST00000330188 ANKRD22Q5VYY1 191 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 ARHGEF18Q6ZSZ5 1173 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 PCGF5Q86SE9 256 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 TRABD2AQ86V40 505 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 RFX6Q8HWS3 928 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 HSPH1Q92598 858 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 L3MBTL3Q96JM7 780 aaPredicted RBP15.28■□□□□ 0.04
TPM3-206ENST00000330188 PEBP4Q96S96 227 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 VPS37BQ9H9H4 285 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 FGFR1OP2Q9NVK5 253 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 RALGAPA2Q2PPJ7 1873 aa15.28■□□□□ 0.04
TPM3-206ENST00000330188 A0A1B0GUA9 196 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 H3BRB1 525 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 APOC4-APOC2K7ER74 178 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 APOC2P02655 101 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 HNRNPH1P31943 449 aaKnown RBP15.27■□□□□ 0.04
TPM3-206ENST00000330188 PCK1P35558 622 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 ZNF143P52747 638 aaPredicted RBP15.27■□□□□ 0.04
TPM3-206ENST00000330188 ADCY1Q08828 1119 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 MARCH8Q5T0T0 291 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 TRNP1Q6NT89 227 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 LCLAT1Q6UWP7 414 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 DPH6Q7L8W6 267 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 UNC45BQ8IWX7 931 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 PPIL6Q8IXY8 311 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 NAT8LQ8N9F0 302 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 CPT1BQ92523 772 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 TUT1Q9H6E5 874 aaKnown RBP15.27■□□□□ 0.04
TPM3-206ENST00000330188 ASNSD1Q9NWL6 643 aa15.27■□□□□ 0.04
TPM3-206ENST00000330188 POC1B-GALNT4F8VUJ3 575 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 GOLGA8MH3BSY2 632 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 ATP2C2O75185 946 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 BANF1O75531 89 aa15.26■□□□□ 0.03
TPM3-206ENST00000330188 SNAI1O95863 264 aaPredicted RBP15.26■□□□□ 0.03
TPM3-206ENST00000330188 PFKMP08237 780 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms