RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 GJB7Q6PEY0 223 aa17.48■□□□□ 0.39
PDLIM1-201ENST00000329399 DSTYKQ6XUX3 929 aa17.48■□□□□ 0.39
PDLIM1-201ENST00000329399 ARHGEF19Q8IW93 802 aa17.48■□□□□ 0.39
PDLIM1-201ENST00000329399 SECISBP2LQ93073 1101 aaKnown RBP17.48■□□□□ 0.39
PDLIM1-201ENST00000329399 ELMO3Q96BJ8 720 aa17.48■□□□□ 0.39
PDLIM1-201ENST00000329399 RTP3Q9BQQ7 232 aa17.48■□□□□ 0.39
PDLIM1-201ENST00000329399 SFXN1Q9H9B4 322 aa17.48■□□□□ 0.39
PDLIM1-201ENST00000329399 L2HGDHQ9H9P8 463 aa17.48■□□□□ 0.39
PDLIM1-201ENST00000329399 NAGPAQ9UK23 515 aa17.48■□□□□ 0.39
PDLIM1-201ENST00000329399 C2orf16Q68DN1 1984 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 A0A0A6YYK5 440 aaPredicted RBP17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 LOC730098B7Z3J9 87 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 ABLIM3O94929 683 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 GZMAP12544 262 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 CYP27A1Q02318 531 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 GFPT1Q06210 699 aaPredicted RBP17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 TRPC3Q13507 836 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 ZNF569Q5MCW4 686 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 ALKBH5Q6P6C2 394 aaKnown RBP17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 TRAPPC11Q7Z392 1133 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 TTC39CQ8N584 583 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 MYRIPQ8NFW9 859 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 SLC30A5Q8TAD4 765 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 ALS2CR12Q96Q35 445 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 PHF7Q9BWX1 381 aaPredicted RBP17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 NENFQ9UMX5 172 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 GUCA1BQ9UMX6 200 aa17.47■□□□□ 0.39
PDLIM1-201ENST00000329399 MYO10Q9HD67 2058 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 A0A087X0T9 212 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 CYB561D2O14569 222 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 ZMYND10O75800 440 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 VNN1O95497 513 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 ASS1P00966 412 aaKnown RBP17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 FAM228BP0C875 321 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 SSTR3P32745 418 aaPredicted RBP17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 CREMQ03060 361 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 WSCD1Q658N2 575 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 CES5AQ6NT32 575 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 RNF19BQ6ZMZ0 732 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 APPL2Q8NEU8 664 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 NAPGQ99747 312 aaPredicted RBP17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 AGPAT1Q99943 283 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 SYT11Q9BT88 431 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 CRISPLD1Q9H336 500 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 PLEKHA4Q9H4M7 779 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 PRKAG3Q9UGI9 489 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 AJAP1Q9UKB5 411 aaPredicted RBP17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 CNTN6Q9UQ52 1028 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 FAM50BQ9Y247 325 aa17.46■□□□□ 0.39
PDLIM1-201ENST00000329399 KPNA7A9QM74 516 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 HCRTO43612 131 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 PAPLNO95428 1278 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 H2AFZP0C0S5 128 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 TAF6P49848 677 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 NTHL1P78549 312 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 YWHAHQ04917 246 aaPredicted RBP17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 ATAT1Q5SQI0 421 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 H2AFVQ71UI9 128 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 CMASQ8NFW8 434 aaPredicted RBP17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 OR10T2Q8NGX3 314 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 ZNF461Q8TAF7 563 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 SLC7A14Q8TBB6 771 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 KREMEN1Q96MU8 473 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 NOX5Q96PH1 765 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 EPHX3Q9H6B9 360 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 VRTNQ9H8Y1 702 aa17.45■□□□□ 0.38
PDLIM1-201ENST00000329399 SPDYE4A6NLX3 237 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 C2CD4DB7Z1M9 353 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 NRG2O14511 850 aaPredicted RBP17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 CCL16O15467 120 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 STAU1O95793 577 aaKnown RBP17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 C1RP00736 705 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 CYP11A1P05108 521 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 C8AP07357 584 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 KRT19P08727 400 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 P4HA1P13674 534 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 TYMPP19971 482 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 PDE6CP51160 858 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 NOP14P78316 857 aaKnown RBP17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 CUL2Q13617 745 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 OVOS1Q6IE37 1185 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 LRRTM3Q86VH5 581 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 HDAC7Q8WUI4 952 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 PRKD2Q9BZL6 878 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 LACRTQ9GZZ8 138 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 HCFC1R1Q9NWW0 138 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 ITGA11Q9UKX5 1188 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 L1RE1Q9UN81 338 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 JRKLQ9Y4A0 524 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 H7C4K7 107 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 DDX3XO00571 662 aaKnown RBP eCLIP17.44■□□□□ 0.381e-17■■■■□ 26
PDLIM1-201ENST00000329399 MTHFRP42898 656 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 RBP5P82980 135 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 ADCY1Q08828 1119 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 CCDC142Q17RM4 750 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 ZNF280DQ6N043 979 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 POTEHQ6S545 545 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 TTC9BQ8N6N2 239 aa17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 SMG7Q92540 1137 aaKnown RBP17.44■□□□□ 0.38
PDLIM1-201ENST00000329399 TATDN2Q93075 761 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms