RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 LY6KQ17RY6 165 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 DCLK2Q8N568 766 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 TAS1R2Q8TE23 839 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 PBXIP1Q96AQ6 731 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 ELAC2Q9BQ52 826 aaKnown RBP11.89□□□□□ -0.51
COL4A5-201ENST00000328300 APRTP07741 180 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 PTGER2P43116 358 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 MAGEA4P43358 317 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 PDAP1Q13442 181 aaKnown RBP11.89□□□□□ -0.51
COL4A5-201ENST00000328300 TAF11Q15544 211 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 SYTL3Q4VX76 610 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 KLRG1Q96E93 195 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 STAU2Q9NUL3 570 aaKnown RBP eCLIP11.89□□□□□ -0.51
COL4A5-201ENST00000328300 DDIT4Q9NX09 232 aa11.89□□□□□ -0.51
COL4A5-201ENST00000328300 TOPAZ1Q8N9V7 1692 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 UBA6A0AVT1 1052 aaPredicted RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 WDR91A4D1P6 747 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 SPDYE5A6NIY4 337 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 MEIS2O14770 477 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 MGEA5O60502 916 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 HMGCRP04035 888 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 MAP4P27816 1152 aaKnown RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 HNRNPH2P55795 449 aaKnown RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 ENPEPQ07075 957 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 MAPK7Q13164 816 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 CCNG2Q16589 344 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 NLRP14Q86W24 1093 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 EXT2Q93063 718 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 SLC35C1Q96A29 364 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 PPWD1Q96BP3 646 aaKnown RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 SMARCD1Q96GM5 515 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 CLMNQ96JQ2 1002 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 SYT15Q9BQS2 421 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 YY1AP1Q9H869 796 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 TLR8Q9NR97 1041 aaKnown RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 RBM12Q9NTZ6 932 aaKnown RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 DERAQ9Y315 318 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 CHD2O14647 1828 aaKnown RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 A0A0G2JND7 137 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 CASP4P49662 377 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 NFIL3Q16649 462 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 SETD3Q86TU7 594 aaPredicted RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 REXO1L1PQ8IX06 675 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 ZFPM1Q8IX07 1006 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 C12orf56Q8IXR9 622 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 TEX12Q9BXU0 123 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 UBXN6Q9BZV1 441 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 L2HGDHQ9H9P8 463 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 SLIT2O94813 1529 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 ESYT3A0FGR9 886 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 ATP9BO43861 1147 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 HADHAP40939 763 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 VSNL1P62760 191 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 FASTKD1Q53R41 847 aaKnown RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 WDR93Q6P2C0 686 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 STAMBPL1Q96FJ0 436 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 SETD4Q9NVD3 440 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 GRID1Q9ULK0 1009 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 PRG3Q9Y2Y8 225 aaPredicted RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 ZNF263O14978 683 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 EFTUD2Q15029 972 aaKnown RBP eCLIP11.88□□□□□ -0.511e-5■□□□□ 8.3
COL4A5-201ENST00000328300 ANKS3Q6ZW76 656 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 PABPC5Q96DU9 382 aaKnown RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 FAM167BQ9BTA0 163 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 ABI2Q9NYB9 513 aaPredicted RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 A0A087X0T9 212 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 PJA2O43164 708 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 DNAJC6O75061 913 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 UPP2O95045 317 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 FAM228BP0C875 321 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 KLK7P49862 253 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 SESN2P58004 480 aaPredicted RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 MYL6P60660 151 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 POLD3Q15054 466 aaPredicted RBP11.88□□□□□ -0.51
COL4A5-201ENST00000328300 TERF2Q15554 542 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 CCNYL1Q8N7R7 359 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 CCDC126Q96EE4 140 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 WNK4Q96J92 1243 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 STK39Q9UEW8 545 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 IPPQ9Y573 584 aa11.88□□□□□ -0.51
COL4A5-201ENST00000328300 MAGEB16A2A368 324 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 LRRIQ3A6PVS8 624 aaPredicted RBP11.87□□□□□ -0.51
COL4A5-201ENST00000328300 POU5F1BQ06416 359 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 TTLL9Q3SXZ7 439 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 DDX53Q86TM3 631 aaKnown RBP11.87□□□□□ -0.51
COL4A5-201ENST00000328300 CHST12Q9NRB3 414 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 KRT82Q9NSB4 513 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 IRAK4Q9NWZ3 460 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 FIS1Q9Y3D6 152 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 PKP3Q9Y446 797 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 SPEF2Q9C093 1822 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 AK9Q5TCS8 1911 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 PEAK1Q9H792 1746 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 TRIM66O15016 1216 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 EPHB2P29323 1055 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 ILDR1Q86SU0 546 aaPredicted RBP11.87□□□□□ -0.51
COL4A5-201ENST00000328300 ACOT1Q86TX2 421 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 SCAF8Q9UPN6 1271 aaKnown RBP11.87□□□□□ -0.51
COL4A5-201ENST00000328300 FAM47DPA6NHR8 397 aa11.87□□□□□ -0.51
COL4A5-201ENST00000328300 GYG2O15488 501 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms