RNA–Protein interactions for RNA: ENST00000327554.2

CCDC60-201, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC60, Length 2,450 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-201ENST00000327554 ARID3BQ8IVW6 561 aaPredicted RBP13.36□□□□□ -0.27
CCDC60-201ENST00000327554 SLF2Q8IX21 1173 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 RCOR2Q8IZ40 523 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 METTL25Q8N6Q8 603 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 CPT1BQ92523 772 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 NKD2Q969F2 451 aaPredicted RBP13.36□□□□□ -0.27
CCDC60-201ENST00000327554 CCDC127Q96BQ5 260 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 HAUS1Q96CS2 278 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 WWP1Q9H0M0 922 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 TMEM8AQ9HCN3 771 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 SOX13Q9UN79 622 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 NDC80O14777 642 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 CCNT2O60583 730 aaKnown RBP13.36□□□□□ -0.27
CCDC60-201ENST00000327554 IFNB1P01574 187 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 IL1R1P14778 569 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 DSG3P32926 999 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 ALDH18A1P54886 795 aaKnown RBP13.36□□□□□ -0.27
CCDC60-201ENST00000327554 TMEM62Q0P6H9 643 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 FAAP100Q0VG06 881 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 ALCAMQ13740 583 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 UBAP2LQ14157 1087 aaKnown RBP13.36□□□□□ -0.27
CCDC60-201ENST00000327554 TBCCQ15814 346 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 ZNF513Q8N8E2 541 aaPredicted RBP13.36□□□□□ -0.27
CCDC60-201ENST00000327554 NAT8LQ8N9F0 302 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 FBXL13Q8NEE6 735 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 C11orf70Q9BRQ4 267 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 LXNQ9BS40 222 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 MECRQ9BV79 373 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 ZNF395Q9H8N7 513 aaPredicted RBP13.36□□□□□ -0.27
CCDC60-201ENST00000327554 RAB20Q9NX57 234 aa13.36□□□□□ -0.27
CCDC60-201ENST00000327554 IQANK1A0A1B0GTG1 560 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SGK1O00141 431 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 STK10O94804 968 aaKnown RBP13.35□□□□□ -0.27
CCDC60-201ENST00000327554 C6orf222P0C671 652 aaPredicted RBP13.35□□□□□ -0.27
CCDC60-201ENST00000327554 MAPTP10636 758 aaKnown RBP13.35□□□□□ -0.27
CCDC60-201ENST00000327554 FOLH1Q04609 750 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 MTM1Q13496 603 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 MTMR2Q13614 643 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SNRNP35Q16560 246 aaKnown RBP13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SHROOM1Q2M3G4 852 aaPredicted RBP13.35□□□□□ -0.27
CCDC60-201ENST00000327554 NADK2Q4G0N4 442 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 PADI6Q6TGC4 694 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 TMC7Q7Z402 723 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 PPIL6Q8IXY8 311 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 LINC00116Q8NCU8 138 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 GAB3Q8WWW8 586 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 CLMNQ96JQ2 1002 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 BTBD9Q96Q07 612 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SETDB2Q96T68 719 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 UNC45AQ9H3U1 944 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 GINM1Q9NU53 330 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 DDX18Q9NVP1 670 aaKnown RBP13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SSX2IPQ9Y2D8 614 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 I3L4J1 428 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 TXNDC9O14530 226 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 CASQ2O14958 399 aaPredicted RBP13.35□□□□□ -0.27
CCDC60-201ENST00000327554 GAS7O60861 476 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SORBS2O94875 1100 aaKnown RBP13.35□□□□□ -0.27
CCDC60-201ENST00000327554 KRT1P04264 644 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 CFHP08603 1231 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 AQP5P55064 265 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SLC25A3Q00325 362 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 CDK18Q07002 472 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 TEX44Q53QW1 395 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 PLEKHA7Q6IQ23 1121 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 C1orf228Q6PIY5 440 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SPOCD1Q6ZMY3 1216 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 TRIM42Q8IWZ5 723 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SLC26A7Q8TE54 656 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SLC44A1Q8WWI5 657 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 MKL1Q969V6 931 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 ACAP3Q96P50 834 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 SRPK1Q96SB4 655 aaKnown RBP13.35□□□□□ -0.27
CCDC60-201ENST00000327554 KAT6AQ92794 2004 aa13.35□□□□□ -0.27
CCDC60-201ENST00000327554 TCRBV7S3A2A0A539 114 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 ARHGAP42A6NI28 874 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 IPO5O00410 1097 aaKnown RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 CSDE1O75534 798 aaKnown RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 SERPINA6P08185 405 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 AOC1P19801 751 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 ADARP55265 1226 aaKnown RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 SNAPC2Q13487 334 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 TLR1Q15399 786 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 TRIP10Q15642 601 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 PCGF5Q86SE9 256 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 PALM2Q8IXS6 379 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 MARVELD2Q8N4S9 558 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 SLC35B2Q8TB61 432 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 DIS3LQ8TF46 1054 aaKnown RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 PPP1R14BQ96C90 147 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 PI4K2AQ9BTU6 479 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 SRP68Q9UHB9 627 aaKnown RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 SIPA1L1O43166 1804 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 hCG_1818297A0A087WSY0 165 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 TLR3O15455 904 aaKnown RBP13.34□□□□□ -0.27
CCDC60-201ENST00000327554 PEX1O43933 1283 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 TMEM63AO94886 807 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 CLPTM1O96005 669 aa13.34□□□□□ -0.27
CCDC60-201ENST00000327554 GALK1P51570 392 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms