RNA–Protein interactions for RNA: ENST00000327351.6

CCDC107-201, Transcript of coiled-coil domain containing 107, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC107, Length 804 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC107-201ENST00000327351 PCDHB8Q9UN66 801 aa18.1■□□□□ 0.49
CCDC107-201ENST00000327351 LZTS1Q9Y250 596 aa18.1■□□□□ 0.49
CCDC107-201ENST00000327351 CEP83Q9Y592 693 aa18.1■□□□□ 0.49
CCDC107-201ENST00000327351 TIMM13Q9Y5L4 95 aaPredicted RBP18.1■□□□□ 0.49
CCDC107-201ENST00000327351 CAPN6Q9Y6Q1 641 aa18.1■□□□□ 0.49
CCDC107-201ENST00000327351 M0QYV0 167 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 NRP1O14786 923 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 CSPG5O95196 566 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 ALDH2P05091 517 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 PTPN1P18031 435 aaKnown RBP18.09■□□□□ 0.49
CCDC107-201ENST00000327351 MMP8P22894 467 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 GPD2P43304 727 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 SLC11A1P49279 550 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 GOLGA7BQ2TAP0 167 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 PPP1R26Q5T8A7 1209 aaPredicted RBP18.09■□□□□ 0.49
CCDC107-201ENST00000327351 PDE12Q6L8Q7 609 aaKnown RBP18.09■□□□□ 0.49
CCDC107-201ENST00000327351 RHOT2Q8IXI1 618 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 SLC39A11Q8N1S5 342 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 TRIM58Q8NG06 486 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 TPCN2Q8NHX9 752 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 UBA3Q8TBC4 463 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 CNOT8Q9UFF9 292 aaKnown RBP18.09■□□□□ 0.49
CCDC107-201ENST00000327351 TSPAN16Q9UKR8 245 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 FAN1Q9Y2M0 1017 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 PRG3Q9Y2Y8 225 aaPredicted RBP18.09■□□□□ 0.49
CCDC107-201ENST00000327351 PCDHGC5Q9Y5F6 944 aa18.09■□□□□ 0.49
CCDC107-201ENST00000327351 COL6A3P12111 3177 aa18.08■□□□□ 0.49
CCDC107-201ENST00000327351 GRID2IPA4D2P6 1211 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 NT5C1B-RDH14C9J2C7 533 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 TADA2AO75478 443 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 PALMO75781 387 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 MTA2O94776 668 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 GALTP07902 379 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 ACAT1P24752 427 aaKnown RBP18.08■□□□□ 0.48
CCDC107-201ENST00000327351 HADHBP55084 474 aaKnown RBP18.08■□□□□ 0.48
CCDC107-201ENST00000327351 PKDCCQ504Y2 493 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 LIN9Q5TKA1 542 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 KIAA0319Q5VV43 1072 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.08■□□□□ 0.48
CCDC107-201ENST00000327351 MMS22LQ6ZRQ5 1243 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 ERICH1Q86X53 443 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 B3GALNT2Q8NCR0 500 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 CALR3Q96L12 384 aaKnown RBP18.08■□□□□ 0.48
CCDC107-201ENST00000327351 ALS2CR12Q96Q35 445 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 NAPGQ99747 312 aaPredicted RBP18.08■□□□□ 0.48
CCDC107-201ENST00000327351 RTP3Q9BQQ7 232 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 C11orf70Q9BRQ4 267 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 OSGEPQ9NPF4 335 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 TLR9Q9NR96 1032 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 FAM49BQ9NUQ9 324 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 CTTNBP2NLQ9P2B4 639 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 STK39Q9UEW8 545 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 CYTH4Q9UIA0 394 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 CDH9Q9ULB4 789 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 COG5Q9UP83 839 aa18.08■□□□□ 0.48
CCDC107-201ENST00000327351 ATMINO43313 823 aaPredicted RBP18.07■□□□□ 0.48
CCDC107-201ENST00000327351 ATP2C2O75185 946 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 CALB1P05937 261 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 RRM1P23921 792 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 DNAJB1P25685 340 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 TCEAL5Q5H9L2 206 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 HNRNPABQ99729 332 aaKnown RBP18.07■□□□□ 0.48
CCDC107-201ENST00000327351 SYT15Q9BQS2 421 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 ACBD6Q9BR61 282 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 CRTAC1Q9NQ79 661 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 ENTPD7Q9NQZ7 604 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 MARCH5Q9NX47 278 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 THEGQ9P2T0 379 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 UVRAGQ9P2Y5 699 aa18.07■□□□□ 0.48
CCDC107-201ENST00000327351 CTAGE9A4FU28 777 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 TRAPPC3O43617 180 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 NCK2O43639 380 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 SETSIPP0DME0 302 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 CCDC130P13994 396 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 PCSK1P29120 753 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 PSMC1P62191 440 aaKnown RBP18.06■□□□□ 0.48
CCDC107-201ENST00000327351 PTPN20Q4JDL3 420 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 C2CD6Q53TS8 623 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 OVOS1Q6IE37 1185 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 PLEKHA7Q6IQ23 1121 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 TMC7Q7Z402 723 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 SLFN11Q7Z7L1 901 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 PHLDB2Q86SQ0 1253 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 TTC30AQ86WT1 665 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.06■□□□□ 0.48
CCDC107-201ENST00000327351 THEM5Q8N1Q8 247 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 LRRC57Q8N9N7 239 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 ANKRD52Q8NB46 1076 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 IGSF21Q96ID5 467 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 NUP85Q9BW27 656 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 NGRNQ9NPE2 291 aaKnown RBP18.06■□□□□ 0.48
CCDC107-201ENST00000327351 HESX1Q9UBX0 185 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 CHORDC1Q9UHD1 332 aaPredicted RBP18.06■□□□□ 0.48
CCDC107-201ENST00000327351 ADAM28Q9UKQ2 775 aa18.06■□□□□ 0.48
CCDC107-201ENST00000327351 MYH10P35580 1976 aa18.05■□□□□ 0.48
CCDC107-201ENST00000327351 TKTP29401 623 aaKnown RBP18.05■□□□□ 0.48
CCDC107-201ENST00000327351 CAMK1Q14012 370 aa18.05■□□□□ 0.48
CCDC107-201ENST00000327351 MDH1BQ5I0G3 518 aa18.05■□□□□ 0.48
CCDC107-201ENST00000327351 LLGL2Q6P1M3 1020 aa18.05■□□□□ 0.48
CCDC107-201ENST00000327351 PAQR9Q6ZVX9 377 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms