RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 FUKQ8N0W3 1084 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 CLEC4CQ8WTT0 213 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 KHSRPQ92945 711 aaKnown RBP eCLIP19.42■□□□□ 0.7
USP39-201ENST00000323701 SLC4A5Q9BY07 1137 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 FUT8Q9BYC5 575 aa19.42■□□□□ 0.7
USP39-201ENST00000323701 PI4K2BG5E9Z4 385 aa19.41■□□□□ 0.7
USP39-201ENST00000323701 BEST1O76090 585 aa19.41■□□□□ 0.7
USP39-201ENST00000323701 RARAP10276 462 aa19.41■□□□□ 0.7
USP39-201ENST00000323701 GLE1Q53GS7 698 aaKnown RBP19.41■□□□□ 0.7
USP39-201ENST00000323701 OR6B2Q6IFH4 312 aa19.41■□□□□ 0.7
USP39-201ENST00000323701 TTC27Q6P3X3 843 aa19.41■□□□□ 0.7
USP39-201ENST00000323701 ZNF280BQ86YH2 543 aa19.41■□□□□ 0.7
USP39-201ENST00000323701 RHOT1Q8IXI2 618 aa19.41■□□□□ 0.7
USP39-201ENST00000323701 EPB41L5Q9HCM4 733 aa19.41■□□□□ 0.7
USP39-201ENST00000323701 CRTAC1Q9NQ79 661 aa19.41■□□□□ 0.7
USP39-201ENST00000323701 WBP1LQ9NX94 342 aa19.41■□□□□ 0.7
USP39-201ENST00000323701 CCDC188H7C350 402 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 TTI1O43156 1089 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 PAPSS1O43252 624 aaPredicted RBP19.4■□□□□ 0.7
USP39-201ENST00000323701 PSTPIP1O43586 416 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 B3GAT3O94766 335 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 PSMA2P25787 234 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 IL1R2P27930 398 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 FLT3P36888 993 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 AARSP49588 968 aaKnown RBP eCLIP19.4■□□□□ 0.7
USP39-201ENST00000323701 CARSP49589 748 aaKnown RBP19.4■□□□□ 0.7
USP39-201ENST00000323701 RABGGTBP53611 331 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 ADCY2Q08462 1091 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 SLC24A5Q71RS6 500 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 TMEM110Q86TL2 294 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 NIPA2Q8N8Q9 360 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 ANKRD52Q8NB46 1076 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 CASKIN2Q8WXE0 1202 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 PGBD4Q96DM1 585 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 HEMGNQ9BXL5 484 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 GDF3Q9NR23 364 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 DDX43Q9NXZ2 648 aaKnown RBP19.4■□□□□ 0.7
USP39-201ENST00000323701 LRCH4O75427 683 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 DDHD2O94830 711 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 PTPN1P18031 435 aaKnown RBP19.4■□□□□ 0.7
USP39-201ENST00000323701 RPL9P32969 192 aaKnown RBP19.4■□□□□ 0.7
USP39-201ENST00000323701 FAM189BP81408 668 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 TAP1Q03518 808 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 CCDC70Q6NSX1 233 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 OLFML1Q6UWY5 402 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 DBF4BQ8NFT6 615 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 RTP3Q9BQQ7 232 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 WDR35Q9P2L0 1181 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 HESX1Q9UBX0 185 aa19.4■□□□□ 0.7
USP39-201ENST00000323701 GRIK3Q13003 919 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 PIGHQ14442 188 aaPredicted RBP19.39■□□□□ 0.69
USP39-201ENST00000323701 DDX42Q86XP3 938 aaKnown RBP eCLIP19.39■□□□□ 0.69
USP39-201ENST00000323701 KATNAL2Q8IYT4 538 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 IPO4Q8TEX9 1081 aaKnown RBP19.39■□□□□ 0.69
USP39-201ENST00000323701 RNF25Q96BH1 459 aaPredicted RBP19.39■□□□□ 0.69
USP39-201ENST00000323701 MIS12Q9H081 205 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 TMEM30AQ9NV96 361 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 PCDH10Q9P2E7 1040 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 FSCN2O14926 492 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 RALAP11233 206 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 TUSC3Q13454 348 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 MDH1BQ5I0G3 518 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 DSTYKQ6XUX3 929 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 RAPGEF5Q92565 580 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 SCLYQ96I15 445 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 NAP1L3Q99457 506 aaPredicted RBP19.39■□□□□ 0.69
USP39-201ENST00000323701 TRIM51Q9BSJ1 452 aa19.39■□□□□ 0.69
USP39-201ENST00000323701 SCN5AQ14524 2016 aa19.38■□□□□ 0.69
USP39-201ENST00000323701 MYBPHLA2RUH7 354 aa19.38■□□□□ 0.69
USP39-201ENST00000323701 BHMG1C9JSJ3 638 aaPredicted RBP19.38■□□□□ 0.69
USP39-201ENST00000323701 TUBBP07437 444 aa19.38■□□□□ 0.69
USP39-201ENST00000323701 SLC25A11Q02978 314 aaKnown RBP19.38■□□□□ 0.69
USP39-201ENST00000323701 BST2Q10589 180 aaKnown RBP19.38■□□□□ 0.69
USP39-201ENST00000323701 C15orf59Q2T9L4 293 aaPredicted RBP19.38■□□□□ 0.69
USP39-201ENST00000323701 SMTNL2Q2TAL5 461 aa19.38■□□□□ 0.69
USP39-201ENST00000323701 KCNT1Q5JUK3 1230 aa19.38■□□□□ 0.69
USP39-201ENST00000323701 CCDC50Q8IVM0 306 aa19.38■□□□□ 0.69
USP39-201ENST00000323701 FNIP1Q8TF40 1166 aa19.38■□□□□ 0.69
USP39-201ENST00000323701 NDRG1Q92597 394 aaKnown RBP19.38■□□□□ 0.69
USP39-201ENST00000323701 TNIP3Q96KP6 325 aa19.38■□□□□ 0.69
USP39-201ENST00000323701 FAM118BQ9BPY3 351 aa19.38■□□□□ 0.69
USP39-201ENST00000323701 R3HDM2Q9Y2K5 976 aaKnown RBP19.38■□□□□ 0.69
USP39-201ENST00000323701 SBDSQ9Y3A5 250 aaKnown RBP eCLIP19.38■□□□□ 0.69
USP39-201ENST00000323701 C2CD4BA6NLJ0 364 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 INPPL1O15357 1258 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 CACNA2D1P54289 1103 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 BCAT1P54687 386 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 DIS3LQ8TF46 1054 aaKnown RBP19.37■□□□□ 0.69
USP39-201ENST00000323701 AENQ8WTP8 325 aaKnown RBP19.37■□□□□ 0.69
USP39-201ENST00000323701 C1orf54Q8WWF1 131 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 IFT81Q8WYA0 676 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 ATG4AQ8WYN0 398 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 HNRNPABQ99729 332 aaKnown RBP19.37■□□□□ 0.69
USP39-201ENST00000323701 ADAM33Q9BZ11 813 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 SLITRK6Q9H5Y7 841 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 UBN1Q9NPG3 1134 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 FAM53CQ9NYF3 392 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 ERLIN1O75477 346 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 SKIP12755 728 aa19.37■□□□□ 0.69
USP39-201ENST00000323701 KRT10P13645 584 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms