RNA–Protein interactions for RNA: ENST00000322875.8

CD46-201, Transcript of CD46 molecule, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CD46, Length 3,278 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-201ENST00000322875 COL5A3P25940 1745 aaPredicted RBP8.17□□□□□ -1.1
CD46-201ENST00000322875 SPDYE16A6NNV3 312 aaPredicted RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 USP17L10C9JJH3 530 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 MSH4O15457 936 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 SNNO75324 88 aaPredicted RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 BANF1O75531 89 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 C1QAP02745 245 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 HNRNPCP07910 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
CD46-201ENST00000322875 CDH2P19022 906 aaPredicted RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 PFKPQ01813 784 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 KLHL38Q2WGJ6 581 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 CC2D2BQ6DHV5 1058 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 SEMA4DQ92854 862 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 TEKT1Q969V4 418 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 MAF1Q9H063 256 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 PRDM11Q9NQV5 511 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 SIRPGQ9P1W8 387 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 KIAA1522Q9P206 1035 aaPredicted RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 MYPNQ86TC9 1320 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 RGPD3A6NKT7 1758 aaPredicted RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 RGPD4Q7Z3J3 1758 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 SH3PXD2BA1X283 911 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 PRR5-ARHGAP8B1AHC4 643 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 LPXNO60711 386 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 TRMUO75648 421 aaKnown RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 FAM13AO94988 1023 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 ZNF24P17028 368 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 SSTR1P30872 391 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 L1CAMP32004 1257 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 PTPN7P35236 360 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 ARSEP51690 589 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 HIRAP54198 1017 aaPredicted RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 RHBDL3P58872 404 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 ARHGAP8P85298 464 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 RABGAP1LQ5R372 815 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 FNBP1LQ5T0N5 605 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 PRPF39Q86UA1 669 aaKnown RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 RHOT1Q8IXI2 618 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 SLC15A3Q8IY34 581 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 RNF168Q8IYW5 571 aaPredicted RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 LRRC47Q8N1G4 583 aaKnown RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 ACTRT2Q8TDY3 377 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 ZNF526Q8TF50 670 aaPredicted RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 NKD2Q969F2 451 aaPredicted RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 BIRC8Q96P09 236 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 TUFT1Q9NNX1 390 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 PAIP2BQ9ULR5 123 aaKnown RBP8.16□□□□□ -1.1
CD46-201ENST00000322875 RAB26Q9ULW5 256 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 BCS1LQ9Y276 419 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 SLX4Q8IY92 1834 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 GOLGA8RI6L899 631 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 SREBF1P36956 1147 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 GCLMP48507 274 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 ACADVLP49748 655 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 GAD2Q05329 585 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 KDSRQ06136 332 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 GPS1Q13098 491 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 SPIDRQ14159 915 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 HIC1Q14526 733 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 PRR16Q569H4 304 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 TMEM126BQ8IUX1 230 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 PPM1KQ8N3J5 372 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 NAT8LQ8N9F0 302 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 ATP11CQ8NB49 1132 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 FAM111AQ96PZ2 611 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 CORO1BQ9BR76 489 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 SLC2A11Q9BYW1 496 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 WWP1Q9H0M0 922 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 ARHGEF38Q9NXL2 777 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 KCND2Q9NZV8 630 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 JAG2Q9Y219 1238 aa8.16□□□□□ -1.1
CD46-201ENST00000322875 RBM47A0AV96 593 aaKnown RBP8.15□□□□□ -1.1
CD46-201ENST00000322875 SERPINB7O75635 380 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 ZNF189O75820 626 aaPredicted RBP8.15□□□□□ -1.1
CD46-201ENST00000322875 SORBS2O94875 1100 aaKnown RBP8.15□□□□□ -1.1
CD46-201ENST00000322875 ITGAVP06756 1048 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 FUT4P22083 530 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 CRKLP46109 303 aaKnown RBP8.15□□□□□ -1.1
CD46-201ENST00000322875 ERFP50548 548 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 GPC3P51654 580 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 MFAP3P55082 362 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 NCKAP1LP55160 1127 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 PLCB3Q01970 1234 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 CYP4A11Q02928 519 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 TMED1Q13445 227 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 LRRC36Q1X8D7 754 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 HSP90AA5PQ58FG0 334 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 CDHR3Q6ZTQ4 885 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 MON1BQ7L1V2 547 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 ERI1Q8IV48 349 aaKnown RBP8.15□□□□□ -1.1
CD46-201ENST00000322875 CROCCP3Q8IVE0 287 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 DAW1Q8N136 415 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 RAB3IL1Q8TBN0 382 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 KCNN1Q92952 543 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 HSPBAP1Q96EW2 488 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 KLF6Q99612 283 aaPredicted RBP8.15□□□□□ -1.1
CD46-201ENST00000322875 C20orf27Q9GZN8 174 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 NYXQ9GZU5 481 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 BRD8Q9H0E9 1235 aa8.15□□□□□ -1.1
CD46-201ENST00000322875 PCDH9Q9HC56 1237 aa8.15□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms