RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SLC39A4Q6P5W5 647 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 PHF13Q86YI8 300 aaPredicted RBP18.72■□□□□ 0.59
PRKCB-202ENST00000321728 PDIK1LQ8N165 341 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 GPD1LQ8N335 351 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 MTBPQ96DY7 904 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 VCPIP1Q96JH7 1222 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 SLC7A8Q9UHI5 535 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 STRIP2Q9ULQ0 834 aa18.72■□□□□ 0.59
PRKCB-202ENST00000321728 ZNF536O15090 1300 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 CREB3O43889 395 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 RNASEH1O60930 286 aaKnown RBP18.71■□□□□ 0.59
PRKCB-202ENST00000321728 INHBAP08476 426 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 ACTR3P61158 418 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 FAAP100Q0VG06 881 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 UGCGQ16739 394 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 LRRC36Q1X8D7 754 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 DCUN1D2Q6PH85 259 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 PRPF39Q86UA1 669 aaKnown RBP18.71■□□□□ 0.59
PRKCB-202ENST00000321728 MYLK4Q86YV6 388 aaPredicted RBP18.71■□□□□ 0.59
PRKCB-202ENST00000321728 ST13P4Q8IZP2 240 aaPredicted RBP18.71■□□□□ 0.59
PRKCB-202ENST00000321728 ZNF516Q92618 1163 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 PPP2R3CQ969Q6 453 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 ZDHHC15Q96MV8 337 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 MCEEQ96PE7 176 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 AGTPBP1Q9UPW5 1226 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 SIPA1L1O43166 1804 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 MYH9P35579 1960 aaKnown RBP18.71■□□□□ 0.59
PRKCB-202ENST00000321728 TCRBV7S3A2A0A539 114 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 KITP10721 976 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 CRABP2P29373 138 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 MCCD1P59942 119 aaPredicted RBP18.71■□□□□ 0.59
PRKCB-202ENST00000321728 ARID3BQ8IVW6 561 aaPredicted RBP18.71■□□□□ 0.59
PRKCB-202ENST00000321728 RSAD2Q8WXG1 361 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 FBXL18Q96ME1 805 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 EBF3Q9H4W6 596 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 OCEL1Q9H607 264 aa18.71■□□□□ 0.59
PRKCB-202ENST00000321728 MARCOQ9UEW3 520 aaPredicted RBP18.71■□□□□ 0.59
PRKCB-202ENST00000321728 XPO7Q9UIA9 1087 aaKnown RBP18.71■□□□□ 0.59
PRKCB-202ENST00000321728 CLRN2A0PK11 232 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 CAPN14A8MX76 684 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 TCP10L2B9ZVM9 353 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 DHX15O43143 795 aaKnown RBP18.7■□□□□ 0.58
PRKCB-202ENST00000321728 HLA-DRAP01903 254 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 C1QBPQ07021 282 aaKnown RBP18.7■□□□□ 0.58
PRKCB-202ENST00000321728 SPP2Q13103 211 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 NAT8LQ8N9F0 302 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 CSRNP1Q96S65 589 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 KCNK4Q9NYG8 393 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 CDKN2BP42772 138 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 SOX10P56693 466 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 RAPH1Q70E73 1250 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 MARK2Q7KZI7 788 aaKnown RBP18.7■□□□□ 0.58
PRKCB-202ENST00000321728 RASSF3Q86WH2 238 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 CDAN1Q8IWY9 1227 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 ACTL9Q8TC94 416 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 MECRQ9BV79 373 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 TCEAL9Q9UHQ7 104 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 TAGLN3Q9UI15 199 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 POLIQ9UNA4 740 aa18.7■□□□□ 0.58
PRKCB-202ENST00000321728 TMEM191CA6NGB0 347 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 COPEO14579 308 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 TMEM191BP0C7N4 346 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 ALDH18A1P54886 795 aaKnown RBP18.69■□□□□ 0.58
PRKCB-202ENST00000321728 TMPRSS15P98073 1019 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 OTUD4Q01804 1114 aaKnown RBP18.69■□□□□ 0.58
PRKCB-202ENST00000321728 KBTBD12Q3ZCT8 623 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 DNAL1Q4LDG9 190 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 FAM91A1Q658Y4 838 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 SLC35B2Q8TB61 432 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 ACAP3Q96P50 834 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 OLFM3Q96PB7 478 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 CCDC28BQ9BUN5 200 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 ZNRF3Q9ULT6 936 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 PLA2G4CQ9UP65 541 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 SLC4A7Q9Y6M7 1214 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 ASTN2O75129 1339 aaPredicted RBP18.69■□□□□ 0.58
PRKCB-202ENST00000321728 CCDC195A0A1B0GUA6 201 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 DCAF8L1A6NGE4 600 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 TMEM63AO94886 807 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 RPL22P35268 128 aaKnown RBP18.69■□□□□ 0.58
PRKCB-202ENST00000321728 BASP1P80723 227 aaKnown RBP18.69■□□□□ 0.58
PRKCB-202ENST00000321728 ZNF200P98182 395 aaPredicted RBP18.69■□□□□ 0.58
PRKCB-202ENST00000321728 ZNF252P-AS1Q0IIN9 211 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 IL31RAQ8NI17 732 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 NCSTNQ92542 709 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 ITFG2Q969R8 447 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 RILPQ96NA2 401 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 SRPK1Q96SB4 655 aaKnown RBP18.69■□□□□ 0.58
PRKCB-202ENST00000321728 IL1RAPL1Q9NZN1 696 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 COMMD3-BMI1R4GMX3 469 aa18.69■□□□□ 0.58
PRKCB-202ENST00000321728 ACO1P21399 889 aaKnown RBP18.68■□□□□ 0.58
PRKCB-202ENST00000321728 YWHAGP61981 247 aaKnown RBP eCLIP18.68■□□□□ 0.58
PRKCB-202ENST00000321728 CUL2Q13617 745 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 DNAJC24Q6P3W2 148 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 DDX55Q8NHQ9 600 aaKnown RBP eCLIP18.68■□□□□ 0.58
PRKCB-202ENST00000321728 KAT6AQ92794 2004 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 ELK3P41970 407 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 AQP5P55064 265 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 SLC18A2Q05940 514 aa18.68■□□□□ 0.58
PRKCB-202ENST00000321728 BST1Q10588 318 aa18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms