RNA–Protein interactions for RNA: ENST00000321105.9

TOP3A-201, Transcript of DNA topoisomerase III alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP3A, Length 4,056 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-201ENST00000321105 ZFP42Q96MM3 310 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 APOBEC3GQ9HC16 384 aaKnown RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 PPARGC1AQ9UBK2 798 aaKnown RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 CPSF3Q9UKF6 684 aaKnown RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 PCDHA3Q9Y5H8 950 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 PLA2G6O60733 806 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 USP12O75317 370 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 TADA2BQ86TJ2 420 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 JOSD2Q8TAC2 188 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 SEPT5Q99719 369 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 LPIN3Q9BQK8 851 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 EPN3Q9H201 632 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 NEUROG2Q9H2A3 272 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 PRDM5Q9NQX1 630 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 WDR35Q9P2L0 1181 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 IQANK1A0A1B0GTG1 560 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 CFAP69A5D8W1 941 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 ZC3H11AO75152 810 aaKnown RBP eCLIP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 TRPA1O75762 1119 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 STAMBPO95630 424 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 PECAM1P16284 738 aaPredicted RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 KRT4P19013 534 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 MMP14P50281 582 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 PPIL2Q13356 520 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 CES3Q6UWW8 571 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 LRRC34Q8IZ02 419 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 THEM5Q8N1Q8 247 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 MICAL1Q8TDZ2 1067 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 FSD1LQ9BXM9 530 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 ARHGAP28Q9P2N2 729 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 TLK1Q9UKI8 766 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 UBQLN1Q9UMX0 589 aaKnown RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 UTRNP46939 3433 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 ITGB4P16144 1822 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 PKD1L3Q7Z443 1732 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 TXNDC9O14530 226 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 TADA2AO75478 443 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 MAP7D1Q3KQU3 841 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 DENND5BQ6ZUT9 1274 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 SRLQ86TD4 932 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 CCNYL1Q8N7R7 359 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 MTMR14Q8NCE2 650 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 ZNF516Q92618 1163 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 CELF6Q96J87 481 aaKnown RBP11.5□□□□□ -0.57
TOP3A-201ENST00000321105 NPHS2Q9NP85 383 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 PCMTD2Q9NV79 361 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 TJP2Q9UDY2 1190 aa11.5□□□□□ -0.57
TOP3A-201ENST00000321105 CLDN5O00501 218 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 GAS2O43903 313 aaKnown RBP11.49□□□□□ -0.57
TOP3A-201ENST00000321105 TYK2P29597 1187 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 ADIGQ0VDE8 80 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 SLC12A1Q13621 1099 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 TSTA3Q13630 321 aaPredicted RBP11.49□□□□□ -0.57
TOP3A-201ENST00000321105 PRPSAP1Q14558 356 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 ADGRF2Q8IZF7 708 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 MINDY3Q9H8M7 445 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 DMAC2Q9NW81 257 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 RRN3P2A6NIE6 340 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 SPDYE5A6NIY4 337 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 VDRP11473 427 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 EIF4BP23588 611 aaKnown RBP11.49□□□□□ -0.57
TOP3A-201ENST00000321105 NRLP54845 237 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 BMPR2Q13873 1038 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 PTGISQ16647 500 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 MGAT5BQ3V5L5 792 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 EFCAB13Q8IY85 973 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 FBXO36Q8NEA4 188 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 HES6Q96HZ4 224 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 SHCBP1LQ9BZQ2 653 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 DHX33Q9H6R0 707 aaKnown RBP11.49□□□□□ -0.57
TOP3A-201ENST00000321105 ETNK1Q9HBU6 452 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 ZBBXA8MT70 800 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 DCDC2CA8MYV0 355 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 FAM200BP0CF97 657 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 AMPD1P23109 780 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 ETFBP38117 255 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 ABCG1P45844 678 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 FNTAP49354 379 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 CPT1AP50416 773 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 SLC26A2P50443 739 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 NOMO3P69849 1222 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 TAP1Q03518 808 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 THOC5Q13769 683 aaKnown RBP11.49□□□□□ -0.57
TOP3A-201ENST00000321105 DCLK3Q9C098 648 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 R3HDMLQ9H3Y0 253 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 RSAD1Q9HA92 442 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 PLEKHA5Q9HAU0 1116 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 ZFATQ9P243 1243 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 FAM8A1Q9UBU6 413 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 LCMT1Q9UIC8 334 aa11.49□□□□□ -0.57
TOP3A-201ENST00000321105 CFLARO15519 480 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 RGS20O76081 388 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 ENDOD1O94919 500 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 LYPLA2O95372 231 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 CHKAP35790 457 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 HSPA9P38646 679 aaKnown RBP11.48□□□□□ -0.57
TOP3A-201ENST00000321105 CRADDP78560 199 aa11.48□□□□□ -0.57
TOP3A-201ENST00000321105 CAV1Q03135 178 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms