RNA–Protein interactions for RNA: ENST00000318080.6

CRAT-201, Transcript of carnitine O-acetyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CRAT, Length 2,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-201ENST00000318080 HLA-DRAP01903 254 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 ACO1P21399 889 aaKnown RBP16.8■□□□□ 0.28
CRAT-201ENST00000318080 KCNA4P22459 653 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 HSD17B4P51659 736 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 PLCB3Q01970 1234 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 OGDHQ02218 1023 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 TNFAIP1Q13829 316 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 FNBP1LQ5T0N5 605 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 SYCP2LQ5T4T6 812 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 RNASEH2BQ5TBB1 312 aaKnown RBP16.8■□□□□ 0.28
CRAT-201ENST00000318080 TDRD10Q5VZ19 366 aaKnown RBP16.8■□□□□ 0.28
CRAT-201ENST00000318080 TAS1R3Q7RTX0 852 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 NCAPG2Q86XI2 1143 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 ALLCQ8N6M5 410 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 CLEC4DQ8WXI8 215 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 SLITRK1Q96PX8 696 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 RHBDL2Q9NX52 303 aa16.8■□□□□ 0.28
CRAT-201ENST00000318080 MAGEA13PA6NCF6 341 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 RNASEH1O60930 286 aaKnown RBP16.79■□□□□ 0.28
CRAT-201ENST00000318080 VNN1O95497 513 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 KRT1P04264 644 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 GDF10P55107 478 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 DYNLT1P63172 113 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 DMP1Q13316 513 aaPredicted RBP16.79■□□□□ 0.28
CRAT-201ENST00000318080 CFAP157Q5JU67 520 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 ZBTB41Q5SVQ8 909 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 TDRPQ86YL5 185 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.79■□□□□ 0.28
CRAT-201ENST00000318080 TCP10LQ8TDR4 215 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 PTCD3Q96EY7 689 aaKnown RBP16.79■□□□□ 0.28
CRAT-201ENST00000318080 ZNF395Q9H8N7 513 aaPredicted RBP16.79■□□□□ 0.28
CRAT-201ENST00000318080 SMG5Q9UPR3 1016 aaKnown RBP16.79■□□□□ 0.28
CRAT-201ENST00000318080 UBIAD1Q9Y5Z9 338 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 ABLIM1O14639 778 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 ALOX15BO15296 676 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 TNNI1P19237 187 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 MCCD1P59942 119 aaPredicted RBP16.79■□□□□ 0.28
CRAT-201ENST00000318080 GPD1LQ8N335 351 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 FAM81BQ96LP2 452 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 ZNF184Q99676 751 aaPredicted RBP16.79■□□□□ 0.28
CRAT-201ENST00000318080 SUDS3Q9H7L9 328 aaPredicted RBP16.79■□□□□ 0.28
CRAT-201ENST00000318080 PCDHB4Q9Y5E5 795 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 PCDHGA4Q9Y5G9 962 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 SSC5DA1L4H1 1573 aa16.79■□□□□ 0.28
CRAT-201ENST00000318080 TCRBV7S3A2A0A539 114 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 GLRA2P23416 452 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 OCRLQ01968 901 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 SP4Q02446 784 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 AP1B1Q10567 949 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 PLEKHA7Q6IQ23 1121 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 C15orf39Q6ZRI6 1047 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 MOB2Q70IA6 237 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 MYLK4Q86YV6 388 aaPredicted RBP16.78■□□□□ 0.28
CRAT-201ENST00000318080 BICD1Q96G01 975 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 RABGEF1Q9UJ41 708 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 EXOC7Q9UPT5 735 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 KAT6AQ92794 2004 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 SGK1O00141 431 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 MAFGO15525 162 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 CCDC22O60826 627 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 GNA15P30679 374 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 NLRP11P59045 1033 aaKnown RBP16.78■□□□□ 0.28
CRAT-201ENST00000318080 DEUP1Q05D60 604 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 SEZ6Q53EL9 994 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 BRDTQ58F21 947 aaPredicted RBP16.78■□□□□ 0.28
CRAT-201ENST00000318080 SLC45A4Q5BKX6 768 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 ABRAQ8N0Z2 381 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 PPFIBP2Q8ND30 876 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 NMD3Q96D46 503 aaKnown RBP16.78■□□□□ 0.28
CRAT-201ENST00000318080 ZBTB45Q96K62 511 aaPredicted RBP16.78■□□□□ 0.28
CRAT-201ENST00000318080 IWS1Q96ST2 819 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 TLE6Q9H808 572 aa16.78■□□□□ 0.28
CRAT-201ENST00000318080 ADARB2Q9NS39 739 aaKnown RBP16.78■□□□□ 0.28
CRAT-201ENST00000318080 FAM237BA0A1B0GVD1 139 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 H3BRJ5 948 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 C2CD2LO14523 706 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 TRAFD1O14545 582 aaPredicted RBP16.77■□□□□ 0.28
CRAT-201ENST00000318080 ZNF862O60290 1169 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 TBC1D12O60347 775 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 ENO1P06733 434 aaKnown RBP16.77■□□□□ 0.28
CRAT-201ENST00000318080 PGM1P36871 562 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 LIN9Q5TKA1 542 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 C4orf19Q8IY42 314 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 NSL1Q96IY1 281 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 TRAPPC9Q96Q05 1148 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 TIPINQ9BVW5 301 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 TMEM120AQ9BXJ8 343 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 EBF3Q9H4W6 596 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 PSMC3IPQ9P2W1 217 aaPredicted RBP16.77■□□□□ 0.28
CRAT-201ENST00000318080 E5RJQ4 531 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 SORBS2O94875 1100 aaKnown RBP16.77■□□□□ 0.28
CRAT-201ENST00000318080 LYPLA2O95372 231 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 ESRRAP11474 423 aaPredicted RBP16.77■□□□□ 0.28
CRAT-201ENST00000318080 GRIA2P42262 883 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 PSMC5P62195 406 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 MAP3K10Q02779 954 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 KDSRQ06136 332 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 CMPK2Q5EBM0 449 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 FEZF2Q8TBJ5 459 aa16.77■□□□□ 0.28
CRAT-201ENST00000318080 WRNIP1Q96S55 665 aa16.77■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms