RNA–Protein interactions for RNA: ENST00000316097.12

SCAMP4-201, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCAMP4, Length 2,684 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-201ENST00000316097 KLHL33A6NCF5 533 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 MSCO60682 206 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 MAGEA4P43358 317 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 OSTNP61366 133 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 CMPK2Q5EBM0 449 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 PHLDB2Q86SQ0 1253 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 DENND1AQ8TEH3 1009 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 MAIP1Q8WWC4 291 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 DHX38Q92620 1227 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 RBM15Q96T37 977 aaKnown RBP eCLIP18.06■□□□□ 0.485e-6■■■□□ 18.3
SCAMP4-201ENST00000316097 ETAA1Q9NY74 926 aa18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 CPSF2Q9P2I0 782 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 DYNC1LI1Q9Y6G9 523 aaKnown RBP18.06■□□□□ 0.48
SCAMP4-201ENST00000316097 INO80B-WBP1J3KQ70 363 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 ABLIM1O14639 778 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 EXTL3O43909 919 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 HBP1O60381 514 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 NPTXRO95502 500 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 CYP11B1P15538 503 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 KRT15P19012 456 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 DAB2IPQ5VWQ8 1189 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 RIBC1Q8N443 379 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 ADAM33Q9BZ11 813 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 INO80BQ9C086 356 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 DLGAP2Q9P1A6 1054 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 ZFP69BQ9UJL9 534 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 PLXNA1Q9UIW2 1896 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 H0YCG3 227 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 DYNC1LI2O43237 492 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 VTNP04004 478 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 RPA3P35244 121 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 LBRQ14739 615 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 PKN2Q16513 984 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 PDK4Q16654 411 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 TMEM130Q8N3G9 435 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 RBBP8NLQ8NC74 664 aaPredicted RBP18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 PPTC7Q8NI37 304 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 MRRFQ96E11 262 aaKnown RBP18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 KIAA1586Q9HCI6 787 aa18.05■□□□□ 0.48
SCAMP4-201ENST00000316097 A0A0B4J269 797 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 H3BRB1 525 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 P4HA2O15460 535 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 C22orf31O95567 290 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 CA4P22748 312 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 GCAP28676 217 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 RAB27AP51159 221 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 HP1BP3Q5SSJ5 553 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 SPOPLQ6IQ16 392 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 RFWD3Q6PCD5 774 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 CAPN12Q6ZSI9 719 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 LBHD1Q9BQE6 289 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 TUT1Q9H6E5 874 aaKnown RBP18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 DCLRE1BQ9H816 532 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 TMEM8AQ9HCN3 771 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 SAYSD1Q9NPB0 183 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 NMRK1Q9NWW6 199 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 RAB20Q9NX57 234 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 RBAKQ9NYW8 714 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 KCNG1Q9UIX4 513 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 STYXL1Q9Y6J8 313 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 NVLO15381 856 aaKnown RBP18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 RALAP11233 206 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 SP100P23497 879 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 PTPN4P29074 926 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 CDR2Q01850 454 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 SLC1A5Q15758 541 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 CCDC6Q16204 474 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 SGSM1Q2NKQ1 1148 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 KHDC1Q4VXA5 237 aaKnown RBP18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 CWF19L1Q69YN2 538 aaKnown RBP18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 NLRP9Q7RTR0 991 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 APBB1IPQ7Z5R6 666 aaPredicted RBP18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 IFNL1Q8IU54 200 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 CCDC89Q8N998 374 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 FBXL13Q8NEE6 735 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 OR6J1Q8NGC5 347 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 UCMAQ8WVF2 138 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 FNBP1Q96RU3 617 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 SMC6Q96SB8 1091 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 ABHD16BQ9H3Z7 469 aa18.04■□□□□ 0.48
SCAMP4-201ENST00000316097 RBM47A0AV96 593 aaKnown RBP18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 PRPF4O43172 522 aaKnown RBP eCLIP18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 DUSP28Q4G0W2 176 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 ZNF467Q7Z7K2 595 aaPredicted RBP18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 OR5B17Q8NGF7 314 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 SHC3Q92529 594 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 TMEM134Q9H6X4 195 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 NPHS2Q9NP85 383 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 UBN1Q9NPG3 1134 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 NEU2Q9Y3R4 380 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 ANKRD33BA6NCL7 494 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 PRKCBP05771 671 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 MFAP3P55082 362 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 MXD4Q14582 209 aaPredicted RBP18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 P3H1Q32P28 736 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 ACAD10Q6JQN1 1059 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 RGS9BPQ6ZS82 235 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 GSTA5Q7RTV2 222 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 OTOAQ7RTW8 1153 aa18.03■□□□□ 0.48
SCAMP4-201ENST00000316097 BBOF1Q8ND07 529 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms