RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 USP1O94782 785 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 ANXA1P04083 346 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 CKMT1AP12532 417 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 HSD3B1P14060 373 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 GNAT2P19087 354 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 PNLIPRP1P54315 467 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 SIM2Q14190 667 aaPredicted RBP4.7□□□□□ -1.66
SMCO3-201ENST00000316048 PTK2BQ14289 1009 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 GRM7Q14831 915 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 ELAVL1Q15717 326 aaKnown RBP4.7□□□□□ -1.66
SMCO3-201ENST00000316048 NT5DC1Q5TFE4 455 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 PLAG1Q6DJT9 500 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 EFCAB12Q6NXP0 572 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 BORAQ6PGQ7 559 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 CYP26C1Q6V0L0 522 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 FAM83AQ86UY5 434 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 TAX1BP1Q86VP1 789 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 CCDC28AQ8IWP9 274 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 PSD4Q8NDX1 1056 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 MESP1Q9BRJ9 268 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 PAGR1Q9BTK6 254 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 CNPPD1Q9BV87 410 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 TM7SF3Q9NS93 570 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 FAM30AQ9NZY2 134 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 ZMYND8Q9ULU4 1186 aaPredicted RBP4.7□□□□□ -1.66
SMCO3-201ENST00000316048 MRPS17Q9Y2R5 130 aaKnown RBP4.7□□□□□ -1.66
SMCO3-201ENST00000316048 POGZQ7Z3K3 1410 aa4.7□□□□□ -1.66
SMCO3-201ENST00000316048 ROCK2O75116 1388 aaKnown RBP4.7□□□□□ -1.66
SMCO3-201ENST00000316048 DEPDC5O75140 1603 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 PMS2P1A4D2B8 440 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 RRN3P2A6NIE6 340 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 EYA2O00167 538 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 GLI2P10070 1586 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 EGR1P18146 543 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 ATICP31939 592 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 CPT1AP50416 773 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 COPAP53621 1224 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 TCF15Q12870 199 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 NPY5RQ15761 445 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 PRR16Q569H4 304 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 C1QL3Q5VWW1 255 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 TAPT1Q6NXT6 567 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 TAF2Q6P1X5 1199 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 GALNT15Q8N3T1 639 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 ST8SIA2Q92186 375 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 DDX17Q92841 729 aaKnown RBP4.69□□□□□ -1.66
SMCO3-201ENST00000316048 ZSWIM1Q9BR11 485 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 KATNAL1Q9BW62 490 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 NECTIN3Q9NQS3 549 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 HSFX1Q9UBD0 423 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 SRP68Q9UHB9 627 aaKnown RBP4.69□□□□□ -1.66
SMCO3-201ENST00000316048 LRRFIP2Q9Y608 721 aaKnown RBP4.69□□□□□ -1.66
SMCO3-201ENST00000316048 DUSP10Q9Y6W6 482 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 RIMBP3CA6NJZ7 1639 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 RIMBP3BA6NNM3 1639 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 RIMBP3Q9UFD9 1639 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 KIF7Q2M1P5 1343 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 PTPRTO14522 1441 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 CNTLNQ9NXG0 1405 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 LOC102723971A0A1B0GUV8 181 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 RRP9O43818 475 aaKnown RBP4.69□□□□□ -1.66
SMCO3-201ENST00000316048 JUPP14923 745 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 CNTFP26441 200 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 MST1P26927 711 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 FOXL1Q12952 345 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 ARHGEF7Q14155 803 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 CACHD1Q5VU97 1274 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 METRNLQ641Q3 311 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP4.69□□□□□ -1.66
SMCO3-201ENST00000316048 KRT28Q7Z3Y7 464 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 FAM124AQ86V42 546 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 CCDC150Q8NCX0 1101 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 ZNF483Q8TF39 744 aaPredicted RBP4.69□□□□□ -1.66
SMCO3-201ENST00000316048 SNX27Q96L92 541 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 TRIB1Q96RU8 372 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 PPP1R9BQ96SB3 815 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 PRPF18Q99633 342 aaKnown RBP4.69□□□□□ -1.66
SMCO3-201ENST00000316048 EPS8L2Q9H6S3 715 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 PLA2G3Q9NZ20 509 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 DNMT3BQ9UBC3 853 aaKnown RBP4.69□□□□□ -1.66
SMCO3-201ENST00000316048 LPAR3Q9UBY5 353 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 ANAPC4Q9UJX5 808 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 TET3O43151 1660 aa4.69□□□□□ -1.66
SMCO3-201ENST00000316048 KIDINS220Q9ULH0 1771 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 KDM5CP41229 1560 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 PRAG1Q86YV5 1406 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 A0A0B4J269 797 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 KCNQ3O43525 872 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 NUAK1O60285 661 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 TSPAN15O95858 294 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 CHEK2O96017 543 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 LMNAP02545 664 aaKnown RBP4.68□□□□□ -1.66
SMCO3-201ENST00000316048 ITGA5P08648 1049 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 TPH1P17752 444 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 MSX2P35548 267 aaPredicted RBP4.68□□□□□ -1.66
SMCO3-201ENST00000316048 VIPR2P41587 438 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 PRKAA2P54646 552 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 PPP2CBP62714 309 aa4.68□□□□□ -1.66
SMCO3-201ENST00000316048 PPP2CAP67775 309 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms