RNA–Protein interactions for RNA: ENST00000315249.11

RFFL-201, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RFFL, Length 7,293 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-201ENST00000315249 FAM131BQ86XD5 332 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 OTULINQ96BN8 352 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 KIF2CQ99661 725 aa14.06□□□□□ -0.16
RFFL-201ENST00000315249 FOXN3O00409 490 aaPredicted RBP14.05□□□□□ -0.16
RFFL-201ENST00000315249 ZBTB39O15060 712 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 TFAP2DQ7Z6R9 452 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 GRID2IPA4D2P6 1211 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 FAM187AA6NFU0 413 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 PON1P27169 355 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 MZF1P28698 734 aaPredicted RBP14.05□□□□□ -0.16
RFFL-201ENST00000315249 FSCBQ5H9T9 825 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 PHACTR4Q8IZ21 702 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 ELAC2Q9BQ52 826 aaKnown RBP14.05□□□□□ -0.16
RFFL-201ENST00000315249 FGFR1OP2Q9NVK5 253 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 TRIM10Q9UDY6 481 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 ADIGQ0VDE8 80 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 TSPAN17Q96FV3 270 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 DBR1Q9UK59 544 aaKnown RBP14.05□□□□□ -0.16
RFFL-201ENST00000315249 KIAA1257Q9ULG3 409 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.05□□□□□ -0.16
RFFL-201ENST00000315249 SNCAIPQ9Y6H5 919 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 MAGOHP61326 146 aaKnown RBP14.05□□□□□ -0.16
RFFL-201ENST00000315249 RRM2BQ7LG56 351 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 MAP10Q9P2G4 905 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 SLC39A10Q9ULF5 831 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 NEURL4Q96JN8 1562 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 DDX5P17844 614 aaKnown RBP14.05□□□□□ -0.16
RFFL-201ENST00000315249 BDNFP23560 247 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 NDST1P52848 882 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 LRRC74AQ0VAA2 488 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 MTHFD1LQ6UB35 978 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 KAT2BQ92831 832 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 FBXO10Q9UK96 956 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 ANO9A1A5B4 782 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 MGEA5O60502 916 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 RBP3P10745 1247 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 DHX34Q14147 1143 aaKnown RBP14.05□□□□□ -0.16
RFFL-201ENST00000315249 TRIM15Q9C019 465 aa14.05□□□□□ -0.16
RFFL-201ENST00000315249 BTBD19C9JJ37 291 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 KDM1AO60341 852 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 AXLP30530 894 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 PTGER2P43116 358 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 MAPK9P45984 424 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 MRPS6P82932 125 aaKnown RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 FNDC3BQ53EP0 1204 aaKnown RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 FAM172AQ8WUF8 416 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 ZBTB45Q96K62 511 aaPredicted RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 CDK5RAP1Q96SZ6 601 aaKnown RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 GOLGA4Q13439 2230 aaKnown RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 A0A1B0GTH6 734 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 HMGB1P1B2RPK0 211 aaPredicted RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 RHOBTB1O94844 696 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 YWHAQP27348 245 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 PREPLQ4J6C6 727 aaPredicted RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 TMEM259Q4ZIN3 620 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 FAXCQ5TGI0 409 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 KRT35Q92764 455 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 MAGEB10Q96LZ2 347 aaPredicted RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 XPO6Q96QU8 1125 aaKnown RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 HIPK3Q9H422 1215 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 GOLPH3Q9H4A6 298 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 ADA2Q9NZK5 511 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 HMGCRP04035 888 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 MCF2P10911 925 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 CDH8P55286 799 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 RHOAP61586 193 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 ZNF284Q2VY69 593 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 TAS1R2Q8TE23 839 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 UBXN6Q9BZV1 441 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 PAK5Q9P286 719 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 LTN1O94822 1766 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 SPECC1L-ADORA2AF8WAN1 911 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 HOXC6P09630 235 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 BRAFP15056 766 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 FXR1P51114 621 aaKnown RBP eCLIP14.04□□□□□ -0.16
RFFL-201ENST00000315249 UNC45BQ8IWX7 931 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 HELQQ8TDG4 1101 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 GAS2L1Q99501 681 aaPredicted RBP14.04□□□□□ -0.16
RFFL-201ENST00000315249 CORO1BQ9BR76 489 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 CHMP2BQ9UQN3 213 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 TPGS1Q6ZTW0 290 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 SLC47A2Q86VL8 602 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 C7orf61Q8IZ16 206 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 FAM136AQ96C01 138 aa14.04□□□□□ -0.16
RFFL-201ENST00000315249 SLITRK3O94933 977 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 VCLP18206 1134 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 TOB1P50616 345 aaPredicted RBP14.03□□□□□ -0.16
RFFL-201ENST00000315249 PDCLQ13371 301 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 E2F5Q15329 346 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 KLHL29Q96CT2 875 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 TASP1Q9H6P5 420 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 HEATR9A2RTY3 570 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 TBC1D3BA6NDS4 549 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 RGPD8O14715 1765 aaPredicted RBP14.03□□□□□ -0.16
RFFL-201ENST00000315249 SGCGQ13326 291 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 PTPAQ15257 358 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 KLRG1Q96E93 195 aa14.03□□□□□ -0.16
RFFL-201ENST00000315249 PNKPQ96T60 521 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 120.4 ms