RNA–Protein interactions for RNA: ENST00000311943.11

SCFD1-201, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 2,016 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-201ENST00000311943 ZFYVE19Q96K21 471 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 MED10Q9BTT4 135 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 SLC46A2Q9BY10 475 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 METTL14Q9HCE5 456 aaKnown RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 KRT82Q9NSB4 513 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 TAB2Q9NYJ8 693 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 GREB1Q4ZG55 1949 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 C2orf78A6NCI8 922 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 AFPP02771 609 aaKnown RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 F11P03951 625 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 ACO1P21399 889 aaKnown RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 PPP1R2P41236 205 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 TUFMP49411 452 aaKnown RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 MAP3K7CLP57077 242 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 TYRO3Q06418 890 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 INCA1Q0VD86 236 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 CUL2Q13617 745 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 NCAPHQ15003 741 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 NFE2Q16621 373 aaPredicted RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 ELMSAN1Q6PJG2 1045 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 PPM1KQ8N3J5 372 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 MAB21L3Q8N8X9 362 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 TTC8Q8TAM2 541 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 ZSCAN18Q8TBC5 510 aaPredicted RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 TFAP2BQ92481 460 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 NDRG1Q92597 394 aaKnown RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 OXCT2Q9BYC2 517 aaPredicted RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 IMPG2Q9BZV3 1241 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 SLITRK6Q9H5Y7 841 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 EPS15L1Q9UBC2 864 aa12.81□□□□□ -0.36
SCFD1-201ENST00000311943 CHORDC1Q9UHD1 332 aaPredicted RBP12.81□□□□□ -0.36
SCFD1-201ENST00000311943 OBSL1O75147 1896 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 ANHXE9PGG2 379 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 MBD3O95983 291 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 ATP1A3P13637 1013 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 MTIF2P46199 727 aaKnown RBP12.8□□□□□ -0.36
SCFD1-201ENST00000311943 ZXDAP98168 799 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 TPD52L1Q16890 204 aaPredicted RBP12.8□□□□□ -0.36
SCFD1-201ENST00000311943 ANO6Q4KMQ2 910 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 GPR158Q5T848 1215 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 DPY19L2P1Q6NXN4 242 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 SASS6Q6UVJ0 657 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 HFE2Q6ZVN8 426 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 CRYBG2Q8N1P7 616 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 UBR7Q8N806 425 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 TAF4BQ92750 862 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 CYFIP2Q96F07 1278 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 ASIC4Q96FT7 647 aa12.8□□□□□ -0.36
SCFD1-201ENST00000311943 INTS2Q9H0H0 1204 aaKnown RBP12.8□□□□□ -0.36
SCFD1-201ENST00000311943 PIK3R2O00459 728 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 AP1G2O75843 785 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 CD72P21854 359 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 KCNMA1Q12791 1236 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 WDR44Q5JSH3 913 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 VITQ6UXI7 678 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 ARID3BQ8IVW6 561 aaPredicted RBP12.79□□□□□ -0.36
SCFD1-201ENST00000311943 ELMOD1Q8N336 334 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 EHBP1Q8NDI1 1231 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 HEXIM2Q96MH2 286 aaKnown RBP12.79□□□□□ -0.36
SCFD1-201ENST00000311943 ASB16Q96NS5 453 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 FUCA2Q9BTY2 467 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 VPS16Q9H269 839 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 SIX2Q9NPC8 291 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 GCNT4Q9P109 453 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 NUDT5Q9UKK9 219 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 KCNJ18B7U540 433 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 CCDC192P0DO97 292 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 ERCC5P28715 1186 aaPredicted RBP12.79□□□□□ -0.36
SCFD1-201ENST00000311943 KCNJ12Q14500 433 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 FOXR2Q6PJQ5 311 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 TMEM270Q6UE05 265 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 CYP26C1Q6V0L0 522 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 C4orf50Q6ZRC1 276 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 CLEC20AQ6ZU45 233 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 TTC30AQ86WT1 665 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 AOPEPQ8N6M6 819 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 UBA3Q8TBC4 463 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 EDAQ92838 391 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 TUBGCP2Q9BSJ2 902 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 NT5C1AQ9BXI3 368 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 GTPBP4Q9BZE4 634 aaKnown RBP12.79□□□□□ -0.36
SCFD1-201ENST00000311943 CA14Q9ULX7 337 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 SORCS3Q9UPU3 1222 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 VPS13AQ96RL7 3174 aa12.79□□□□□ -0.36
SCFD1-201ENST00000311943 MYH10P35580 1976 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 KRBA1A5PL33 1030 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 HHLA1C9JL84 531 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 TNFRSF10BO14763 440 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 GABBR2O75899 941 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 ABL1P00519 1130 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 POU2F2P09086 479 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 PRKCSHP14314 528 aaPredicted RBP12.78□□□□□ -0.36
SCFD1-201ENST00000311943 PON1P27169 355 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 ENPEPQ07075 957 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 TAF10Q12962 218 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 VEPH1Q14D04 833 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 TAF12Q16514 161 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 PLCD3Q8N3E9 789 aa12.78□□□□□ -0.36
SCFD1-201ENST00000311943 C2orf15Q8WU43 125 aaKnown RBP12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 747.5 ms