RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 GAP43P17677 238 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 EIF4BP23588 611 aaKnown RBP18.87■□□□□ 0.61
SPSB4-201ENST00000310546 NOVP48745 357 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 PDE1BQ01064 536 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 DLGAP5Q15398 846 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 DNAL1Q4LDG9 190 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 NLRX1Q86UT6 975 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 ZFP28Q8NHY6 868 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 FOXP3Q9BZS1 431 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 GPAMQ9HCL2 828 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 TAGLN3Q9UI15 199 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 DNPEPQ9ULA0 475 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 USTQ9Y2C2 406 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 TGDSO95455 350 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 PCSK6P29122 969 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 GPX6P59796 221 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 FOLH1Q04609 750 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 SULT2A1Q06520 285 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 ANKRD20A4Q4UJ75 823 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 SLC44A4Q53GD3 710 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 ODR4Q5SWX8 454 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 LRRC8BQ6P9F7 803 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 UGT2A3Q6UWM9 527 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 TPH2Q8IWU9 490 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 RILPQ96NA2 401 aa18.87■□□□□ 0.61
SPSB4-201ENST00000310546 MYH11P35749 1972 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 BOLA2-SMG1P6H3BVE0 249 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 KRT10P13645 584 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 SLC25A3Q00325 362 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 HIC1Q14526 733 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 C3orf62Q6ZUJ4 267 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 ZNF720Q7Z2F6 126 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 ARID3BQ8IVW6 561 aaPredicted RBP18.86■□□□□ 0.61
SPSB4-201ENST00000310546 FAM71AQ8IYT1 594 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 RABGEF1Q9UJ41 708 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 PRR5-ARHGAP8B1AHC4 643 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 ALOX15BO15296 676 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 SORBS2O94875 1100 aaKnown RBP18.86■□□□□ 0.61
SPSB4-201ENST00000310546 GH2P01242 217 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 SMIM18P0DKX4 95 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 ARHGAP8P85298 464 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 PPP1R18Q6NYC8 613 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 PAOXQ6QHF9 649 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 METTL25Q8N6Q8 603 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 ICA1LQ8NDH6 482 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 PYROXD1Q8WU10 500 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 KREMEN1Q96MU8 473 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 DMAC2Q9NW81 257 aa18.86■□□□□ 0.61
SPSB4-201ENST00000310546 PI4K2BG5E9Z4 385 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 ZBTB5O15062 677 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 MT-ND3P03897 115 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 VAMP7P51809 220 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 ARHGAP4P98171 946 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 GAD2Q05329 585 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 DALRD3Q5D0E6 543 aaKnown RBP18.85■□□□□ 0.61
SPSB4-201ENST00000310546 EFHC2Q5JST6 749 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 EFHC1Q5JVL4 640 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 MAP3K21Q5TCX8 1036 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 SAMD7Q7Z3H4 446 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 EIF2AK1Q9BQI3 630 aaKnown RBP18.85■□□□□ 0.61
SPSB4-201ENST00000310546 EPB41L1Q9H4G0 881 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 SSU72Q9NP77 194 aaKnown RBP18.85■□□□□ 0.61
SPSB4-201ENST00000310546 LZTS1Q9Y250 596 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 TMEM221A6NGB7 291 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 NDC80O14777 642 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 CHMP2AO43633 222 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 ZNF200P98182 395 aaPredicted RBP18.85■□□□□ 0.61
SPSB4-201ENST00000310546 TBL3Q12788 808 aaKnown RBP18.85■□□□□ 0.61
SPSB4-201ENST00000310546 ATRNL1Q5VV63 1379 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 PLIN4Q96Q06 1357 aa18.85■□□□□ 0.61
SPSB4-201ENST00000310546 CAPN8A6NHC0 703 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 PDE5AO76074 875 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 ATF7P17544 494 aaPredicted RBP18.84■□□□□ 0.61
SPSB4-201ENST00000310546 EMP3P54852 163 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 PLCB3Q01970 1234 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 UBAP2LQ14157 1087 aaKnown RBP18.84■□□□□ 0.61
SPSB4-201ENST00000310546 RSBN1LQ6PCB5 846 aaPredicted RBP18.84■□□□□ 0.61
SPSB4-201ENST00000310546 NIM1KQ8IY84 436 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 ZNF395Q9H8N7 513 aaPredicted RBP18.84■□□□□ 0.61
SPSB4-201ENST00000310546 SPON1Q9HCB6 807 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 PCDH18Q9HCL0 1135 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 PI4KBQ9UBF8 816 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 PCDHA1Q9Y5I3 950 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 A0A088AWK7 358 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 IGKV6D-41A0A0C4DH26 115 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 GLRA2P23416 452 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 ECE1P42892 770 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 HIF1AQ16665 826 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 RABGAP1LQ5R372 815 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 SYDE2Q5VT97 1194 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 CC2D2BQ6DHV5 1058 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 ACAD10Q6JQN1 1059 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 KLHL35Q6PF15 583 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 RTKN2Q8IZC4 609 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 CYP2W1Q8TAV3 490 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 CPA5Q8WXQ8 436 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 ACAP3Q96P50 834 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 MECRQ9BV79 373 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 APPL1Q9UKG1 709 aa18.84■□□□□ 0.61
SPSB4-201ENST00000310546 PCDHGB4Q9UN71 923 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms