RNA–Protein interactions for RNA: ENST00000309877.11

IRF3-201, Transcript of interferon regulatory factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene IRF3, Length 1,691 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-201ENST00000309877 IP6K2Q9UHH9 426 aa23.77■■□□□ 1.4
IRF3-201ENST00000309877 LCMT1Q9UIC8 334 aa23.77■■□□□ 1.4
IRF3-201ENST00000309877 MICAL3Q7RTP6 2002 aa23.77■■□□□ 1.4
IRF3-201ENST00000309877 SIGLEC16A6NMB1 481 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 MIF4GDA9UHW6 222 aaKnown RBP23.76■■□□□ 1.39
IRF3-201ENST00000309877 PIK3R2O00459 728 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 SYN3O14994 580 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 CAPN15O75808 1086 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 BAIAP3O94812 1187 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 FAM200BP0CF97 657 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 SLC1A1P43005 524 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 WDR5P61964 334 aaKnown RBP23.76■■□□□ 1.39
IRF3-201ENST00000309877 RPL7AP62424 266 aaKnown RBP23.76■■□□□ 1.39
IRF3-201ENST00000309877 CKAP4Q07065 602 aaKnown RBP23.76■■□□□ 1.39
IRF3-201ENST00000309877 PAQR9Q6ZVX9 377 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 TMEM110Q86TL2 294 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 MCRS1Q96EZ8 462 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 PCED1BQ96HM7 432 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 XPO1O14980 1071 aaKnown RBP23.76■■□□□ 1.39
IRF3-201ENST00000309877 PROSCO94903 275 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 NPR3P17342 541 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 ACADSBP45954 432 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 BCAR1P56945 870 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 PPIGQ13427 754 aaKnown RBP eCLIP23.76■■□□□ 1.393e-8■■■■□ 19.9
IRF3-201ENST00000309877 PPP1R15BQ5SWA1 713 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 CCDC181Q5TID7 509 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 FAM117BQ6P1L5 589 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 UBL4BQ8N7F7 174 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 PBKQ96KB5 322 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 HSFY1Q96LI6 401 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 CYLDQ9NQC7 956 aa23.76■■□□□ 1.39
IRF3-201ENST00000309877 SF3B1O75533 1304 aaKnown RBP eCLIP23.75■■□□□ 1.393e-7■■■■■ 55.1
IRF3-201ENST00000309877 NT5C1B-RDH14C9J2C7 533 aa23.75■■□□□ 1.39
IRF3-201ENST00000309877 PLA2G4AP47712 749 aa23.75■■□□□ 1.39
IRF3-201ENST00000309877 ALDH7A1P49419 539 aaKnown RBP23.75■■□□□ 1.39
IRF3-201ENST00000309877 DEFB103AP81534 67 aa23.75■■□□□ 1.39
IRF3-201ENST00000309877 ELAVL2Q12926 359 aaKnown RBP23.75■■□□□ 1.39
IRF3-201ENST00000309877 MAPRE1Q15691 268 aaKnown RBP23.75■■□□□ 1.39
IRF3-201ENST00000309877 FAM102AQ5T9C2 384 aaPredicted RBP23.75■■□□□ 1.39
IRF3-201ENST00000309877 FAM171A1Q5VUB5 890 aa23.75■■□□□ 1.39
IRF3-201ENST00000309877 FAM171BQ6P995 826 aa23.75■■□□□ 1.39
IRF3-201ENST00000309877 CEP57Q86XR8 500 aa23.75■■□□□ 1.39
IRF3-201ENST00000309877 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.75■■□□□ 1.39
IRF3-201ENST00000309877 METTL5Q9NRN9 209 aaKnown RBP23.75■■□□□ 1.39
IRF3-201ENST00000309877 KRT82Q9NSB4 513 aa23.75■■□□□ 1.39
IRF3-201ENST00000309877 MARCH5Q9NX47 278 aa23.75■■□□□ 1.39
IRF3-201ENST00000309877 CES2O00748 559 aa23.74■■□□□ 1.39
IRF3-201ENST00000309877 OAZ2O95190 189 aa23.74■■□□□ 1.39
IRF3-201ENST00000309877 CDR1P51861 262 aa23.74■■□□□ 1.39
IRF3-201ENST00000309877 SPOUT1Q5T280 376 aaKnown RBP23.74■■□□□ 1.39
IRF3-201ENST00000309877 FAM183BPQ6ZVS7 135 aa23.74■■□□□ 1.39
IRF3-201ENST00000309877 FAM35AQ86V20 835 aa23.74■■□□□ 1.39
IRF3-201ENST00000309877 CREG2Q8IUH2 290 aa23.74■■□□□ 1.39
IRF3-201ENST00000309877 OR10T2Q8NGX3 314 aa23.74■■□□□ 1.39
IRF3-201ENST00000309877 MYLPFQ96A32 169 aa23.74■■□□□ 1.39
IRF3-201ENST00000309877 PCDH10Q9P2E7 1040 aa23.74■■□□□ 1.39
IRF3-201ENST00000309877 UQCRHLA0A096LP55 91 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 DDX3YO15523 660 aaKnown RBP23.73■■□□□ 1.39
IRF3-201ENST00000309877 AP1G2O75843 785 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 UQCRHP07919 91 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 PBX3P40426 434 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 PAFAH1B1P43034 410 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 FUT10Q6P4F1 479 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 OTOP2Q7RTS6 562 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 ZDHHC17Q8IUH5 632 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 BADQ92934 168 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 GPR62Q9BZJ7 368 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 RNF14Q9UBS8 474 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 CTAGE15A4D2H0 777 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 CTAGE8P0CG41 777 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 LCP1P13796 627 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 MAN1A1P33908 653 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 RFC1P35251 1148 aaPredicted RBP23.73■■□□□ 1.39
IRF3-201ENST00000309877 MAP3K7CLP57077 242 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 CFAP221Q4G0U5 840 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 VARS2Q5ST30 1063 aaKnown RBP23.73■■□□□ 1.39
IRF3-201ENST00000309877 CLEC20AQ6ZU45 233 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 TMCO2Q7Z6W1 182 aaPredicted RBP23.73■■□□□ 1.39
IRF3-201ENST00000309877 CTAGE6Q86UF2 777 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 PIGZQ86VD9 579 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 CPNE8Q86YQ8 564 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 SCUBE3Q8IX30 993 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 CTAGE4Q8IX94 777 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 C7orf61Q8IZ16 206 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 SMARCD1Q96GM5 515 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 TMEM209Q96SK2 561 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 CWH43Q9H720 699 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 USTQ9Y2C2 406 aa23.73■■□□□ 1.39
IRF3-201ENST00000309877 CCDC66A2RUB6 948 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 ZBBXA8MT70 800 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 CEP104O60308 925 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 FGBP02675 491 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 CTNNA2P26232 953 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 RPL34P49207 117 aaKnown RBP23.72■■□□□ 1.39
IRF3-201ENST00000309877 SLC6A3Q01959 620 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 FPGSQ05932 587 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 PIGHQ14442 188 aaPredicted RBP23.72■■□□□ 1.39
IRF3-201ENST00000309877 DCP1BQ8IZD4 617 aaKnown RBP23.72■■□□□ 1.39
IRF3-201ENST00000309877 LRRN4CLQ8ND94 238 aa23.72■■□□□ 1.39
IRF3-201ENST00000309877 JOSD2Q8TAC2 188 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms