RNA–Protein interactions for RNA: ENST00000309017.7

PTPN7-201, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPN7, Length 3,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-201ENST00000309017 DRG1Q9Y295 367 aaKnown RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 MEI4A8MW99 385 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 LYNP07948 512 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 ANPEPP15144 967 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 SERPINB6P35237 376 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 CHI3L2Q15782 390 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 SPDYAQ5MJ70 313 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 TDRD10Q5VZ19 366 aaKnown RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 ATG16L1Q676U5 607 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 DARS2Q6PI48 645 aaKnown RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 NUDCD3Q8IVD9 361 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 KCTD6Q8NC69 237 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 SLC26A7Q8TE54 656 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 ZNF606Q8WXB4 792 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 WWP1Q9H0M0 922 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 DDX56Q9NY93 547 aaKnown RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 SERPINA10Q9UK55 444 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 A0A1B0GVG6 124 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 KBTBD13C9JR72 458 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 TOM1L1O75674 476 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 RPL22P35268 128 aaKnown RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 AQP5P55064 265 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 EIF3EP60228 445 aaKnown RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 SPP2Q13103 211 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 MTERF2Q49AM1 385 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 CIAPIN1Q6FI81 312 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 SLC39A4Q6P5W5 647 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 DPH6Q7L8W6 267 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 FAM160B2Q86V87 743 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 C4orf19Q8IY42 314 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 TMEM35BQ8NCS4 154 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 ZNF516Q92618 1163 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 ASCC2Q9H1I8 757 aaPredicted RBP11.66□□□□□ -0.54
PTPN7-201ENST00000309017 COL20A1Q9P218 1284 aa11.66□□□□□ -0.54
PTPN7-201ENST00000309017 H7C0C1 242 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 KRT37O76014 449 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 ITGAVP06756 1048 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 WEE2P0C1S8 567 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 RARBP10826 455 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 ATP5OP48047 213 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 NRLP54845 237 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 NLRP11P59045 1033 aaKnown RBP11.65□□□□□ -0.54
PTPN7-201ENST00000309017 LGSNQ5TDP6 509 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 MTHFD1LQ6UB35 978 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 KBTBD2Q8IY47 623 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 LARGE2Q8N3Y3 721 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 E2F7Q96AV8 911 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 FAF2Q96CS3 445 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 VCPIP1Q96JH7 1222 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 SERAC1Q96JX3 654 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 SRPK1Q96SB4 655 aaKnown RBP11.65□□□□□ -0.54
PTPN7-201ENST00000309017 SHCBP1LQ9BZQ2 653 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 ST6GALNAC4Q9H4F1 302 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 CYP4F11Q9HBI6 524 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 RAVER2Q9HCJ3 691 aaKnown RBP11.65□□□□□ -0.54
PTPN7-201ENST00000309017 TMX2Q9Y320 296 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 TCRBV7S3A2A0A539 114 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 RBP3P10745 1247 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 JAK3P52333 1124 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 MTMR2Q13614 643 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 TRMT5Q32P41 509 aaKnown RBP11.65□□□□□ -0.54
PTPN7-201ENST00000309017 ARHGEF16Q5VV41 709 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 ARMC3Q5W041 872 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 ARHGAP22Q7Z5H3 698 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 PHF13Q86YI8 300 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-201ENST00000309017 ARHGAP18Q8N392 663 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 SKA1Q96BD8 255 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 MMADHCQ9H3L0 296 aaPredicted RBP11.65□□□□□ -0.54
PTPN7-201ENST00000309017 KRT82Q9NSB4 513 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 MAD1L1Q9Y6D9 718 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 EP400Q96L91 3159 aa11.65□□□□□ -0.54
PTPN7-201ENST00000309017 EXTL3O43909 919 aa11.65□□□□□ -0.55
PTPN7-201ENST00000309017 BMPR2Q13873 1038 aa11.65□□□□□ -0.55
PTPN7-201ENST00000309017 PIGHQ14442 188 aaPredicted RBP11.65□□□□□ -0.55
PTPN7-201ENST00000309017 OASLQ15646 514 aaKnown RBP11.65□□□□□ -0.55
PTPN7-201ENST00000309017 TRIM42Q8IWZ5 723 aa11.65□□□□□ -0.55
PTPN7-201ENST00000309017 TTC13Q8NBP0 860 aa11.65□□□□□ -0.55
PTPN7-201ENST00000309017 PRMT6Q96LA8 375 aaPredicted RBP11.65□□□□□ -0.55
PTPN7-201ENST00000309017 TAAR1Q96RJ0 339 aa11.65□□□□□ -0.55
PTPN7-201ENST00000309017 TUBGCP5Q96RT8 1024 aa11.65□□□□□ -0.55
PTPN7-201ENST00000309017 RMDN3Q96TC7 470 aa11.65□□□□□ -0.55
PTPN7-201ENST00000309017 ECSITQ9BQ95 431 aa11.65□□□□□ -0.55
PTPN7-201ENST00000309017 MSTO1Q9BUK6 570 aa11.65□□□□□ -0.55
PTPN7-201ENST00000309017 POLR3FQ9H1D9 316 aaPredicted RBP11.65□□□□□ -0.55
PTPN7-201ENST00000309017 SSU72Q9NP77 194 aaKnown RBP11.65□□□□□ -0.55
PTPN7-201ENST00000309017 TMEM191CA6NGB0 347 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 DHX15O43143 795 aaKnown RBP11.64□□□□□ -0.55
PTPN7-201ENST00000309017 FAM155BO75949 473 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 RNF8O76064 485 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 TMEM63AO94886 807 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 DLDP09622 509 aaKnown RBP11.64□□□□□ -0.55
PTPN7-201ENST00000309017 TMEM191BP0C7N4 346 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 BST1Q10588 318 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 ASPHQ12797 758 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 NCOA4Q13772 614 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 HIC1Q14526 733 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 ZACNQ401N2 412 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 DNAL1Q4LDG9 190 aa11.64□□□□□ -0.55
PTPN7-201ENST00000309017 GPAT2Q6NUI2 795 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms