RNA–Protein interactions for RNA: ENST00000308987.5

CKS1B-201, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CKS1B, Length 759 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-201ENST00000308987 FAM221AA4D161 298 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 HAS3O00219 553 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 NKRFO15226 690 aaKnown RBP eCLIP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 NOBOXO60393 691 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 RPS6KA5O75582 802 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 DDAH1O94760 285 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 BAIAP3O94812 1187 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 PRAMEF1O95521 474 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 SLPIP03973 132 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 LINC00271P0C7V0 271 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 ZNF286BP0CG31 522 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 GOLGA8HP0CJ92 632 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 ACTN1P12814 892 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 ZNF20P17024 532 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 KRT2P35908 639 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 LTBRP36941 435 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 PPP1R2P41236 205 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 ST13P50502 369 aaKnown RBP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 HTRA4P83105 476 aaPredicted RBP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 ATP2C1P98194 919 aaPredicted RBP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 SP2Q02086 613 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 BFSP2Q13515 415 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 SMC1AQ14683 1233 aaKnown RBP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 LONRF2Q1L5Z9 754 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 SLC35G1Q2M3R5 365 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 LEXMQ3ZCV2 418 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 PLEKHN1Q494U1 663 aaPredicted RBP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 USH1GQ495M9 461 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 ZNF618Q5T7W0 954 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 ARL6IP4Q66PJ3 421 aaKnown RBP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 ISM2Q6H9L7 571 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 WDR93Q6P2C0 686 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 CYP26C1Q6V0L0 522 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 SEPT14Q6ZU15 432 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 TOGARAM2Q6ZUX3 1019 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 LRRC8DQ7L1W4 858 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 NAT16Q8N8M0 369 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 IGSF22Q8N9C0 903 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 DNERQ8NFT8 737 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 IL31RAQ8NI17 732 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 FBXO27Q8NI29 283 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 NEK9Q8TD19 979 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 NOC3LQ8WTT2 800 aaKnown RBP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 CCDC12Q8WUD4 166 aaPredicted RBP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 RUBCNQ92622 972 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 PAGE5Q96GU1 130 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 FCRL2Q96LA5 508 aaPredicted RBP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 MED15Q96RN5 788 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 RAD9AQ99638 391 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 UBAC1Q9BSL1 405 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 C1QTNF3Q9BXJ4 246 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 UBA5Q9GZZ9 404 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 MKRN2Q9H000 416 aaKnown RBP5.35□□□□□ -1.55
CKS1B-201ENST00000308987 CSRNP2Q9H175 543 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 VIPAS39Q9H9C1 493 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 TCP11L1Q9NUJ3 509 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 VTI1BQ9UEU0 232 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 RWDD2AQ9UIY3 292 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 ACSL6Q9UKU0 697 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 TELO2Q9Y4R8 837 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 PCDHB6Q9Y5E3 794 aa5.35□□□□□ -1.55
CKS1B-201ENST00000308987 EP300Q09472 2414 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 CTAGE9A4FU28 777 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 H3BQ06 376 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 SORBS3O60504 671 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 KPNA6O60684 536 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 DNAJA2O60884 412 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 PPP1R11O60927 126 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 F2P00734 622 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 C6P13671 934 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 KCNA5P22460 613 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 OAS2P29728 719 aaKnown RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 POLR2BP30876 1174 aaKnown RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 LONP1P36776 959 aaKnown RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 GDF5P43026 501 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 MAPKAPK2P49137 400 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 ADKP55263 362 aaKnown RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 DLX2Q07687 328 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 MPP2Q14168 576 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 TARBP2Q15633 366 aaKnown RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 CCDC178Q5BJE1 867 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 RRP12Q5JTH9 1297 aaKnown RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 BEND6Q5SZJ8 279 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 ZC3H14Q6PJT7 736 aaKnown RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 CATIPQ7Z7H3 387 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 SLCO6A1Q86UG4 719 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 RAB11FIP4Q86YS3 637 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 DBF4BQ8NFT6 615 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 GOLGA5Q8TBA6 731 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 CAGE1Q8TC20 777 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 DHX58Q96C10 678 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 C8orf49Q96NF6 230 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 TMEM74Q96NL1 305 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 TGS1Q96RS0 853 aaKnown RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 NAPGQ99747 312 aaPredicted RBP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 PRDM14Q9GZV8 571 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.34□□□□□ -1.55
CKS1B-201ENST00000308987 CUEDC2Q9H467 287 aa5.34□□□□□ -1.55
CKS1B-201ENST00000308987 HAUS4Q9H6D7 363 aa5.34□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 48.4 ms