RNA–Protein interactions for RNA: ENST00000306071.6

CHRNB1-201, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNB1, Length 2,557 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-201ENST00000306071 SHROOM1Q2M3G4 852 aaPredicted RBP19.73■□□□□ 0.75
CHRNB1-201ENST00000306071 KLC3Q6P597 504 aa19.73■□□□□ 0.75
CHRNB1-201ENST00000306071 PIP4K2CQ8TBX8 421 aa19.73■□□□□ 0.75
CHRNB1-201ENST00000306071 EPB41L1Q9H4G0 881 aa19.73■□□□□ 0.75
CHRNB1-201ENST00000306071 CCDC195A0A1B0GUA6 201 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 COPEO14579 308 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 HLA-DOAP06340 250 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 INHBAP08476 426 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 IL1R1P14778 569 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 HIRAP54198 1017 aaPredicted RBP19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 NCOA4Q13772 614 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 UBAP2LQ14157 1087 aaKnown RBP19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 TRIP10Q15642 601 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 ACSF2Q96CM8 615 aaPredicted RBP19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 ZNF577Q9BSK1 485 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 CCDC106Q9BWC9 280 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 CNTN3Q9P232 1028 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 SOX13Q9UN79 622 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 COQ4Q9Y3A0 265 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 PCDHB2Q9Y5E7 798 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 DDX39AO00148 427 aaKnown RBP19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 VILLO15195 856 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 SERPINB6P35237 376 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 SLC25A3Q00325 362 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 BST1Q10588 318 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 ANKRD20A4Q4UJ75 823 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 RNF111Q6ZNA4 994 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 HIPK4Q8NE63 616 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 CATSPER2Q96P56 530 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 WDR83Q9BRX9 315 aaKnown RBP19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 BLOC1S6Q9UL45 172 aa19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 FARP1Q9Y4F1 1045 aaPredicted RBP19.72■□□□□ 0.75
CHRNB1-201ENST00000306071 C15orf38-AP3S2A0A0A6YYH1 394 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 A0A0J9YVX5 310 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 KLF11O14901 512 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 SLC16A4O15374 487 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 CFBP00751 764 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 ITGAVP06756 1048 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 EPHB1P54762 984 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 TBCCQ15814 346 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 SPOCD1Q6ZMY3 1216 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 ARPINQ7Z6K5 226 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 CPT1BQ92523 772 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 CLMNQ96JQ2 1002 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 SRPK1Q96SB4 655 aaKnown RBP19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 C1orf21Q9H246 121 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 C10orf88Q9H8K7 445 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 ZNF395Q9H8N7 513 aaPredicted RBP19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 SNCAIPQ9Y6H5 919 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 FOCADQ5VW36 1801 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 FAM163BP0C2L3 166 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 DSG3P32926 999 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 XIAPP98170 497 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 FOLH1Q04609 750 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 TMED1Q13445 227 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 UGT2A3Q6UWM9 527 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 C15orf52Q6ZUT6 534 aaKnown RBP19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 ICA1LQ8NDH6 482 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 TMEM174Q8WUU8 243 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 C7orf26Q96N11 449 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 TMEM165Q9HC07 324 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 PCDHGA4Q9Y5G9 962 aa19.71■□□□□ 0.75
CHRNB1-201ENST00000306071 CLPTM1O96005 669 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 RPL5P46777 297 aaKnown RBP19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 SLC18A2Q05940 514 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 SFSWAPQ12872 951 aaKnown RBP19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 GRAMD1BQ3KR37 738 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 ATG16L1Q676U5 607 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 KLHDC10Q6PID8 442 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 ISLR2Q6UXK2 745 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 PDIK1LQ8N165 341 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 POMGNT1Q8WZA1 660 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 E2F7Q96AV8 911 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 CCDC124Q96CT7 223 aaKnown RBP19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 PRICKLE1Q96MT3 831 aaPredicted RBP19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 SENP7Q9BQF6 1050 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 WDR11Q9BZH6 1224 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 C1orf112Q9NSG2 853 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 SCINQ9Y6U3 715 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 IVNS1ABPQ9Y6Y0 642 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 CFHP08603 1231 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 C6orf222P0C671 652 aaPredicted RBP19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 SV2AQ7L0J3 742 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 ZNF677Q86XU0 584 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 NKD2Q969F2 451 aaPredicted RBP19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 SH2D3AQ9BRG2 576 aa19.7■□□□□ 0.74
CHRNB1-201ENST00000306071 HNRNPCP07910 306 aaKnown RBP eCLIP19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 MAPTP10636 758 aaKnown RBP19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 CPOXP36551 454 aa19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 ADARP55265 1226 aaKnown RBP19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 DYNLT1P63172 113 aa19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 ZNF200P98182 395 aaPredicted RBP19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 GCNT1Q02742 428 aa19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 CYLC2Q14093 348 aaPredicted RBP19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 CHI3L2Q15782 390 aa19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 FBXL19Q6PCT2 694 aa19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 C1orf228Q6PIY5 440 aa19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 CDHR3Q6ZTQ4 885 aa19.69■□□□□ 0.74
CHRNB1-201ENST00000306071 TRMT1LQ7Z2T5 733 aaKnown RBP19.69■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms