RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 KRT18P05783 430 aaKnown RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 LYNP07948 512 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 KRT13P13646 458 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 MMP8P22894 467 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 MAGEA12P43365 314 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 RAD23BP54727 409 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 CDK16Q00536 496 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 CTBSQ01459 385 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 TAP1Q03518 808 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 STRN3Q13033 797 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 MORF4L2Q15014 288 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ARHGAP44Q17R89 818 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 NSMFQ6X4W1 530 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ZPBP2Q6X784 338 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 LRRC74BQ6ZQY2 392 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SV2AQ7L0J3 742 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 MIER3Q7Z3K6 550 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 PRPF39Q86UA1 669 aaKnown RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 SRRM1Q8IYB3 904 aaKnown RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 GPD1LQ8N335 351 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 CDHR1Q96JP9 859 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 NR1H4Q96RI1 486 aaPredicted RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 SORT1Q99523 831 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 GORASP1Q9BQQ3 440 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 PORCNQ9H237 461 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 LHX5Q9H2C1 402 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 PAPOLBQ9NRJ5 636 aaKnown RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 TXLNGQ9NUQ3 528 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ZNF214Q9UL59 606 aaPredicted RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 CITO14578 2027 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 TTLL13PA6NNM8 815 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 BTBD19C9JJ37 291 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SPAG7O75391 227 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 FBXO21O94952 628 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 PRKCHP24723 683 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 TGFB2P61812 414 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 PDE1BQ01064 536 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SLC34A1Q06495 639 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 MTMR1Q13613 665 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SPARCL1Q14515 664 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 NAA25Q14CX7 972 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 GSTA3Q16772 222 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SNX30Q5VWJ9 437 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 IZUMO3Q5VZ72 239 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 RAPH1Q70E73 1250 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ALDH16A1Q8IZ83 802 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 LINC01465Q8N7H1 131 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 MGARPQ8TDB4 240 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 GRK7Q8WTQ7 553 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 STON2Q8WXE9 905 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 RBM15Q96T37 977 aaKnown RBP eCLIP5.72□□□□□ -1.49
VPS50-202ENST00000305866 CCDC28BQ9BUN5 200 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ADAM33Q9BZ11 813 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 PITPNM3Q9BZ71 974 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SENP6Q9GZR1 1112 aaPredicted RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 USP29Q9HBJ7 922 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 DNAJC17Q9NVM6 304 aaKnown RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 UBAP1Q9NZ09 502 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SLC7A8Q9UHI5 535 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 MTMR7Q9Y216 660 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SLC4A7Q9Y6M7 1214 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 CHD5Q8TDI0 1954 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 KAT6AQ92794 2004 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 TLDC2A0PJX2 215 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SMIM23A6NLE4 172 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 NFIBO00712 420 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ATP9BO43861 1147 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 GAS2O43903 313 aaKnown RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 CCNT2O60583 730 aaKnown RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 NAMPTP43490 491 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 MXI1P50539 228 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 CYP2J2P51589 502 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 CDR1P51861 262 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 TAF11Q15544 211 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 FAM187BQ17R55 369 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 P3H1Q32P28 736 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 C2CD6Q53TS8 623 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SFT2D3Q587I9 215 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ODF2Q5BJF6 829 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 FAM182BQ5T319 152 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ZNF772Q68DY9 489 aaPredicted RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 MFSD7Q6UXD7 560 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 PPP1R21Q6ZMI0 780 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ARHGEF18Q6ZSZ5 1173 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 USP37Q86T82 979 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 LRRC6Q86X45 466 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ABRAQ8N0Z2 381 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 DNAJC9Q8WXX5 260 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 IRGQQ8WZA9 623 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 PRICKLE1Q96MT3 831 aaPredicted RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 C11orf84Q9BUA3 381 aaPredicted RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 NMUR2Q9GZQ4 415 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 TRABDQ9H4I3 376 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ZNF395Q9H8N7 513 aaPredicted RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 GPRC5CQ9NQ84 441 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 ZNF212Q9UDV6 495 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 SMG5Q9UPR3 1016 aaKnown RBP5.72□□□□□ -1.49
VPS50-202ENST00000305866 SHOC2Q9UQ13 582 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 PCDHA10Q9Y5I2 948 aa5.72□□□□□ -1.49
VPS50-202ENST00000305866 DNAH12Q6ZR08 3092 aa5.72□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms