RNA–Protein interactions for RNA: ENST00000305264.7

HDAC3-201, Transcript of histone deacetylase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC3, Length 1,959 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-201ENST00000305264 SEC24AO95486 1093 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 FECHP22830 423 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 PKDCCQ504Y2 493 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 LILRA6Q6PI73 481 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 ANKRD52Q8NB46 1076 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 PPP1R9BQ96SB3 815 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 PCDHB18PQ96TA0 734 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 ABCB6Q9NP58 842 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 HESX1Q9UBX0 185 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 ATP8B3O60423 1300 aa28.74■■■□□ 2.19
HDAC3-201ENST00000305264 SOAT2O75908 522 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 GLUD1P00367 558 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 FAM200BP0CF97 657 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 EIF4A3P38919 411 aaKnown RBP28.73■■■□□ 2.19
HDAC3-201ENST00000305264 CDK17Q00537 523 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 ADGRE1Q14246 886 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 CLEC20AQ6ZU45 233 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 TMEM139Q8IV31 216 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 PDCL3Q9H2J4 239 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 SEPT11Q9NVA2 429 aaKnown RBP28.73■■■□□ 2.19
HDAC3-201ENST00000305264 NRIP1P48552 1158 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 BCAT1P54687 386 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 SEPT5Q99719 369 aaPredicted RBP28.73■■■□□ 2.19
HDAC3-201ENST00000305264 SMOQ99835 787 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 DUSP16Q9BY84 665 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 TLE6Q9H808 572 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 FBXW11Q9UKB1 542 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 MTCL1Q9Y4B5 1905 aaKnown RBP28.73■■■□□ 2.19
HDAC3-201ENST00000305264 PATJQ8NI35 1801 aa28.73■■■□□ 2.19
HDAC3-201ENST00000305264 NPR3P17342 541 aa28.72■■■□□ 2.19
HDAC3-201ENST00000305264 SECISBP2LQ93073 1101 aaKnown RBP28.72■■■□□ 2.19
HDAC3-201ENST00000305264 KCNK16Q96T55 309 aa28.72■■■□□ 2.19
HDAC3-201ENST00000305264 CYP4F11Q9HBI6 524 aa28.72■■■□□ 2.19
HDAC3-201ENST00000305264 TULP2O00295 520 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 PTMAP06454 111 aaKnown RBP28.71■■■□□ 2.19
HDAC3-201ENST00000305264 GTF2F1P35269 517 aaKnown RBP eCLIP28.71■■■□□ 2.19
HDAC3-201ENST00000305264 GPR15P49685 360 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 PDE4CQ08493 712 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 BST2Q10589 180 aaKnown RBP28.71■■■□□ 2.19
HDAC3-201ENST00000305264 DUSP6Q16828 381 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 MGAT5BQ3V5L5 792 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 ZMIZ2Q8NF64 920 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 BAG1Q99933 345 aaPredicted RBP28.71■■■□□ 2.19
HDAC3-201ENST00000305264 NSUN3Q9H649 340 aaKnown RBP28.71■■■□□ 2.19
HDAC3-201ENST00000305264 NHEJ1Q9H9Q4 299 aaPredicted RBP28.71■■■□□ 2.19
HDAC3-201ENST00000305264 DDX3XO00571 662 aaKnown RBP eCLIP28.71■■■□□ 2.194e-13■■■■□ 23.7
HDAC3-201ENST00000305264 HAPLN1P10915 354 aaPredicted RBP28.71■■■□□ 2.19
HDAC3-201ENST00000305264 EPCAMP16422 314 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 MAGEA11P43364 429 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 MAP3K7CLP57077 242 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 MAPK8IP2Q13387 824 aaPredicted RBP28.71■■■□□ 2.19
HDAC3-201ENST00000305264 Q7L0L9 218 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 C1orf131Q8NDD1 294 aaKnown RBP28.71■■■□□ 2.19
HDAC3-201ENST00000305264 CYTH4Q9UIA0 394 aa28.71■■■□□ 2.19
HDAC3-201ENST00000305264 F8VP50 259 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 TNFAIP3P21580 790 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 GPD2P43304 727 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 RBM10P98175 930 aaKnown RBP28.7■■■□□ 2.19
HDAC3-201ENST00000305264 TCEAL5Q5H9L2 206 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 VSTM1Q6UX27 236 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 CYP26C1Q6V0L0 522 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 SCN4BQ8IWT1 228 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 LRRC8AQ8IWT6 810 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 TCEAL8Q8IYN2 117 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 WDTC1Q8N5D0 677 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 SLC22A17Q8WUG5 538 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP28.7■■■□□ 2.19
HDAC3-201ENST00000305264 LHX5Q9H2C1 402 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 CSNK1G1Q9HCP0 422 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 DMAP1Q9NPF5 467 aaPredicted RBP28.7■■■□□ 2.19
HDAC3-201ENST00000305264 ADAMTS1Q9UHI8 967 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 HCFC2Q9Y5Z7 792 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 MTCH2Q9Y6C9 303 aa28.7■■■□□ 2.19
HDAC3-201ENST00000305264 SSU72P8A0A1W2PR75 194 aa28.7■■■□□ 2.18
HDAC3-201ENST00000305264 SOWAHDA6NJG2 315 aa28.7■■■□□ 2.18
HDAC3-201ENST00000305264 GRIK1P39086 918 aa28.7■■■□□ 2.18
HDAC3-201ENST00000305264 ASTE1Q2TB18 679 aaPredicted RBP28.7■■■□□ 2.18
HDAC3-201ENST00000305264 KREMEN2Q8NCW0 462 aa28.7■■■□□ 2.18
HDAC3-201ENST00000305264 LMCD1Q9NZU5 365 aa28.7■■■□□ 2.18
HDAC3-201ENST00000305264 PRRG1O14668 218 aa28.69■■■□□ 2.18
HDAC3-201ENST00000305264 CYP1A1P04798 512 aaPredicted RBP28.69■■■□□ 2.18
HDAC3-201ENST00000305264 ELF1P32519 619 aa28.69■■■□□ 2.18
HDAC3-201ENST00000305264 NOMO3P69849 1222 aa28.69■■■□□ 2.18
HDAC3-201ENST00000305264 DDR2Q16832 855 aa28.69■■■□□ 2.18
HDAC3-201ENST00000305264 SDHAF4Q5VUM1 108 aa28.69■■■□□ 2.18
HDAC3-201ENST00000305264 SLC30A5Q8TAD4 765 aa28.69■■■□□ 2.18
HDAC3-201ENST00000305264 YIPF1Q9Y548 306 aa28.69■■■□□ 2.18
HDAC3-201ENST00000305264 A0A087X0T9 212 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 FAM228BP0C875 321 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 SETSIPP0DME0 302 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 CDH5P33151 784 aaPredicted RBP28.68■■■□□ 2.18
HDAC3-201ENST00000305264 NAA35Q5VZE5 725 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 LLGL2Q6P1M3 1020 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 STKLD1Q8NE28 680 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 SLC7A14Q8TBB6 771 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 SLC35F5Q8WV83 523 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 DEF6Q9H4E7 631 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 MAN1C1Q9NR34 630 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 HSFX1Q9UBD0 423 aa28.68■■■□□ 2.18
HDAC3-201ENST00000305264 MAFFQ9ULX9 164 aa28.68■■■□□ 2.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms