RNA–Protein interactions for RNA: ENST00000302516.9

SF3B3-201, Transcript of splicing factor 3b subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SF3B3, Length 9,720 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-201ENST00000302516 PRAMEF22A3QJZ6 481 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 ATP9BO43861 1147 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 TALDO1P37837 337 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 FOXO4P98177 505 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 TTLL6Q8N841 843 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 STKLD1Q8NE28 680 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 DIS3LQ8TF46 1054 aaKnown RBP7.92□□□□□ -1.14
SF3B3-201ENST00000302516 RIT2Q99578 217 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 CD209Q9NNX6 404 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 SAR1AQ9NR31 198 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 RHBDL2Q9NX52 303 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 LSM7Q9UK45 103 aaKnown RBP7.92□□□□□ -1.14
SF3B3-201ENST00000302516 DRG1Q9Y295 367 aaKnown RBP7.92□□□□□ -1.14
SF3B3-201ENST00000302516 MMRN1Q13201 1228 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 ACAD10Q6JQN1 1059 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 SLC7A14Q8TBB6 771 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 GLMNQ92990 594 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 PPP1R36Q96LQ0 422 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 KATNA1O75449 491 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 CYBBP04839 570 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 MPOP05164 745 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 RBP1P09455 135 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 EPHA10Q5JZY3 1008 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 STOX1Q6ZVD7 989 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 KRT73Q86Y46 540 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 CENPLQ8N0S6 344 aaPredicted RBP7.92□□□□□ -1.14
SF3B3-201ENST00000302516 DPF2Q92785 391 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 CEP44Q9C0F1 390 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 SMARCAD1Q9H4L7 1026 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 ATP6V1B1P15313 513 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 TCF3P15923 654 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 GARTP22102 1010 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 TTLL9Q3SXZ7 439 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 REXO1L1PQ8IX06 675 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 LRRC34Q8IZ02 419 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 SAMD3Q8N6K7 520 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 KYQ8NBH2 561 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 SETD9Q8NE22 299 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 DLG3Q92796 817 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 VPS33AQ96AX1 596 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 BDH2Q9BUT1 245 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 KATNAL1Q9BW62 490 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 MBD2Q9UBB5 411 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 MYMKA6NI61 221 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 PIK3CDO00329 1044 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 MLNP12872 115 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 TTKP33981 857 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 TIGD7Q6NT04 549 aaPredicted RBP7.92□□□□□ -1.14
SF3B3-201ENST00000302516 CD302Q8IX05 232 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 FAM210AQ96ND0 272 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 CNGB3Q9NQW8 809 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 KIAA1257Q9ULG3 409 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 MAGEB16A2A368 324 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 TMEM191CA6NGB0 347 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 PTGER2P43116 358 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 OSCP1Q8WVF1 389 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 C9orf72Q96LT7 481 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 CD248Q9HCU0 757 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 RABGEF1Q9UJ41 708 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 CHD4Q14839 1912 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 GRIK1P39086 918 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 SLC30A5Q8TAD4 765 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 OTULINQ96BN8 352 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 KLHL11Q9NVR0 708 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 MTMR4Q9NYA4 1195 aa7.92□□□□□ -1.14
SF3B3-201ENST00000302516 RPA1P27694 616 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 RAD23AP54725 363 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 PTENP60484 403 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 CNTN1Q12860 1018 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 RASA2Q15283 850 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 ARID3BQ8IVW6 561 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 FAM71DQ8N9W8 422 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 ENGASEQ8NFI3 743 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 RMND5BQ96G75 393 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 DDX20Q9UHI6 824 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 MYH11P35749 1972 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 HOXB6P17509 224 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 R3HDM1Q15032 1099 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 C1orf131Q8NDD1 294 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 PRDM16Q9HAZ2 1276 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 LATS2Q9NRM7 1088 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 COMMD8Q9NX08 183 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 TRIM10Q9UDY6 481 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 GGT7Q9UJ14 662 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 FLT1P17948 1338 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 HEATR9A2RTY3 570 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 TRIM13O60858 407 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 RPLP2P05387 115 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 RGS2P41220 211 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 ITGA1P56199 1179 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 NAA20P61599 178 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 MAD2L1Q13257 205 aaPredicted RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 KIZQ2M2Z5 673 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 ARHGAP22Q7Z5H3 698 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 EPS8L3Q8TE67 593 aaKnown RBP7.91□□□□□ -1.14
SF3B3-201ENST00000302516 INPP5DQ92835 1189 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 LRRC39Q96DD0 335 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 HES6Q96HZ4 224 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 C1orf50Q9BV19 199 aa7.91□□□□□ -1.14
SF3B3-201ENST00000302516 C15orf41Q9Y2V0 281 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms