RNA–Protein interactions for RNA: ENST00000302251.9

PDGFD-201, Transcript of platelet derived growth factor D, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDGFD, Length 4,052 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFD-201ENST00000302251 PDK4Q16654 411 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 SPDYCQ5MJ68 293 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 HEATR6Q6AI08 1181 aaKnown RBP12.66□□□□□ -0.38
PDGFD-201ENST00000302251 SLFN12LQ6IEE8 588 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 C1orf186Q6ZWK4 172 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 UBA3Q8TBC4 463 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 CCT7Q99832 543 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 MECRQ9BV79 373 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 LRRC19Q9H756 370 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 SLC5A4Q9NY91 659 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 FNDC3AQ9Y2H6 1198 aaKnown RBP12.66□□□□□ -0.38
PDGFD-201ENST00000302251 BCL9LQ86UU0 1499 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 MCF2P10911 925 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 KCNA4P22459 653 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 ITKQ08881 620 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 MORF4L2Q15014 288 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 C16orf46Q6P387 395 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 VSTM1Q6UX27 236 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 SPOCD1Q6ZMY3 1216 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 CLNKQ7Z7G1 428 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 TRABD2AQ86V40 505 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 MXRA8Q9BRK3 442 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 ARHGEF3Q9NR81 526 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 GPATCH2LQ9NWQ4 482 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 MEIS2O14770 477 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 TPBGLP0DKB5 382 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 SHMT1P34896 483 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 PTGIRP43119 386 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 CYLC2Q14093 348 aaPredicted RBP12.66□□□□□ -0.38
PDGFD-201ENST00000302251 KBTBD12Q3ZCT8 623 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 COBLL1Q53SF7 1204 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 KDELC2Q7Z4H8 507 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 POLNQ7Z5Q5 900 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 USP6NLQ92738 828 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 CCDC138Q96M89 665 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 EBF2Q9HAK2 575 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 KCNMB3Q9NPA1 279 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 KLHL8Q9P2G9 620 aaPredicted RBP12.66□□□□□ -0.38
PDGFD-201ENST00000302251 KAT6AQ92794 2004 aa12.66□□□□□ -0.38
PDGFD-201ENST00000302251 KBTBD13C9JR72 458 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 SP100P23497 879 aaPredicted RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 MSX2P35548 267 aaPredicted RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 MCL1Q07820 350 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 FAM43BQ6ZT52 329 aaPredicted RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 IFNEQ86WN2 208 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 EXD1Q8NHP7 514 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 SRPK1Q96SB4 655 aaKnown RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 STAU2Q9NUL3 570 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 STRIP2Q9ULQ0 834 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 PCDHAC2Q9Y5I4 1007 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 SDC4P31431 198 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 JAK3P52333 1124 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 WDR4P57081 412 aaKnown RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 TAS2R40P59535 323 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 RPL7AP62424 266 aaKnown RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 KRT76Q01546 638 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 PIGHQ14442 188 aaPredicted RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 ACAP1Q15027 740 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 PPP1R15BQ5SWA1 713 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 FAM160B2Q86V87 743 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 CCDC97Q96F63 343 aaPredicted RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 CYP26B1Q9NR63 512 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 SLC24A2Q9UI40 661 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 AFG3L2Q9Y4W6 797 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 TBC1D12O60347 775 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 SMNDC1O75940 238 aaKnown RBP eCLIP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 LDHAP00338 332 aaKnown RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 FAM200BP0CF97 657 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 SNX16P57768 344 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 FOXD4Q12950 439 aaPredicted RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 FLOT2Q14254 428 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 KCTD21Q4G0X4 260 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 EFHC1Q5JVL4 640 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 TTC39BQ5VTQ0 682 aaPredicted RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 ACAD11Q709F0 780 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 PID1Q7Z2X4 250 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 SLFN11Q7Z7L1 901 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 ZBTB46Q86UZ6 589 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 USP13Q92995 863 aaPredicted RBP12.65□□□□□ -0.38
PDGFD-201ENST00000302251 SGF29Q96ES7 293 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 TAGLN3Q9UI15 199 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 WASF2Q9Y6W5 498 aa12.65□□□□□ -0.38
PDGFD-201ENST00000302251 MYH2Q9UKX2 1941 aa12.65□□□□□ -0.39
PDGFD-201ENST00000302251 GYS1P13807 737 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 ECHS1P30084 290 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 RPS6P62753 249 aaKnown RBP12.64□□□□□ -0.39
PDGFD-201ENST00000302251 CDK16Q00536 496 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 CUL2Q13617 745 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 DUOXA2Q1HG44 320 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 TTC7BQ86TV6 843 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 ZCCHC9Q8N567 271 aaKnown RBP12.64□□□□□ -0.39
PDGFD-201ENST00000302251 GDPD5Q8WTR4 605 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 PGBD4Q96DM1 585 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 CMTM5Q96DZ9 223 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 NCANO14594 1321 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 FSCN2O14926 492 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 GSC2O15499 205 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 PSTPIP1O43586 416 aa12.64□□□□□ -0.39
PDGFD-201ENST00000302251 MARSP56192 900 aaKnown RBP12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms