RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 CXCL17Q6UXB2 119 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 NPNTQ6UXI9 565 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 RFX6Q8HWS3 928 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 RNF169Q8NCN4 708 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 CLEC4CQ8WTT0 213 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 MAIP1Q8WWC4 291 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 NDRG1Q92597 394 aaKnown RBP15.33■□□□□ 0.04
SMG8-201ENST00000300917 STRIP2Q9ULQ0 834 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 TRIP11Q15643 1979 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 COL1A2P08123 1366 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 SCN1AP35498 2009 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 TJP3O95049 919 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 DARSP14868 501 aaKnown RBP15.33■□□□□ 0.04
SMG8-201ENST00000300917 MDH1P40925 334 aaKnown RBP15.33■□□□□ 0.04
SMG8-201ENST00000300917 SNX17Q15036 470 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 CCNG2Q16589 344 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 TRNP1Q6NT89 227 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 ZC3H18Q86VM9 953 aaKnown RBP15.33■□□□□ 0.04
SMG8-201ENST00000300917 ACTL9Q8TC94 416 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 IPO4Q8TEX9 1081 aaKnown RBP15.33■□□□□ 0.04
SMG8-201ENST00000300917 GRK7Q8WTQ7 553 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 RXFP2Q8WXD0 754 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 MAGEB5Q9BZ81 275 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 ITGA11Q9UKX5 1188 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 NRCAMQ92823 1304 aa15.33■□□□□ 0.04
SMG8-201ENST00000300917 hCG_1818297A0A087WSY0 165 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 LIASO43766 372 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 PAEPP09466 180 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 RARBP10826 455 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 CDKN2BP42772 138 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 IFNAR2P48551 515 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 GAD2Q05329 585 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 POU5F1BQ06416 359 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 TFDP3Q5H9I0 405 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 ZNF410Q86VK4 478 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 IFNLR1Q8IU57 520 aaPredicted RBP15.32■□□□□ 0.04
SMG8-201ENST00000300917 TRIP12Q14669 1992 aaPredicted RBP15.32■□□□□ 0.04
SMG8-201ENST00000300917 SYNJ2BP-COX16A0A087WUM0 186 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 RRN3P2A6NIE6 340 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 SPTLC1O15269 473 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 SHOX2O60902 331 aaPredicted RBP15.32■□□□□ 0.04
SMG8-201ENST00000300917 RNF8O76064 485 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 VDRP11473 427 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 LCP1P13796 627 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 CREB1P16220 341 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 ACAT1P24752 427 aaKnown RBP15.32■□□□□ 0.04
SMG8-201ENST00000300917 GDF10P55107 478 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 FKBP1BP68106 108 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 OTUD4Q01804 1114 aaKnown RBP15.32■□□□□ 0.04
SMG8-201ENST00000300917 PTK6Q13882 451 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 GNASQ5JWF2 1037 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 MORN1Q5T089 497 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 TTC30AQ86WT1 665 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 RASAL3Q86YV0 1011 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 COX16Q9P0S2 106 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 C2CD2Q9Y426 696 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 RASGRF2O14827 1237 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 TFE3P19532 575 aaPredicted RBP15.32■□□□□ 0.04
SMG8-201ENST00000300917 CDH5P33151 784 aaPredicted RBP15.32■□□□□ 0.04
SMG8-201ENST00000300917 AFF1P51825 1210 aaKnown RBP15.32■□□□□ 0.04
SMG8-201ENST00000300917 ATXN1P54253 815 aaKnown RBP15.32■□□□□ 0.04
SMG8-201ENST00000300917 PPP2R2AP63151 447 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 SOX4Q06945 474 aaPredicted RBP15.32■□□□□ 0.04
SMG8-201ENST00000300917 NETO2Q8NC67 525 aa15.32■□□□□ 0.04
SMG8-201ENST00000300917 STAU2Q9NUL3 570 aaKnown RBP eCLIP15.32■□□□□ 0.04
SMG8-201ENST00000300917 RARGP13631 454 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 CTGFP29279 349 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 ATICP31939 592 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 SKOR1P84550 965 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 SLC25A11Q02978 314 aaKnown RBP15.31■□□□□ 0.04
SMG8-201ENST00000300917 FASTKD3Q14CZ7 662 aaKnown RBP15.31■□□□□ 0.04
SMG8-201ENST00000300917 CNGA2Q16280 664 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 TAX1BP1Q86VP1 789 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 ARRDC4Q8NCT1 418 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 SNX27Q96L92 541 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 PEBP4Q96S96 227 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 LHX5Q9H2C1 402 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 ITIH2P19823 946 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 CDH6P55285 790 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 TRIM32Q13049 653 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 LRRC14Q15048 493 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 FSCN1Q16658 493 aaKnown RBP15.31■□□□□ 0.04
SMG8-201ENST00000300917 HADHQ16836 314 aaKnown RBP15.31■□□□□ 0.04
SMG8-201ENST00000300917 C1orf228Q6PIY5 440 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 BEST2Q8NFU1 509 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 CWC15Q9P013 229 aaKnown RBP15.31■□□□□ 0.04
SMG8-201ENST00000300917 USP18Q9UMW8 372 aa15.31■□□□□ 0.04
SMG8-201ENST00000300917 TIMM13Q9Y5L4 95 aaPredicted RBP15.31■□□□□ 0.04
SMG8-201ENST00000300917 SMIM28A0A1B0GU29 152 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 ATP2C2O75185 946 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 PFKMP08237 780 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 PECAM1P16284 738 aaPredicted RBP15.3■□□□□ 0.04
SMG8-201ENST00000300917 CRHR2Q13324 411 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 SLMAPQ14BN4 828 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 SOWAHAQ2M3V2 549 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 PPP6R3Q5H9R7 873 aaPredicted RBP15.3■□□□□ 0.04
SMG8-201ENST00000300917 HOOK3Q86VS8 718 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 CCDC89Q8N998 374 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 LPPQ93052 612 aa15.3■□□□□ 0.04
SMG8-201ENST00000300917 RUNDC3BQ96NL0 473 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms