RNA–Protein interactions for RNA: ENST00000300413.9

SNRPD1-201, Transcript of small nuclear ribonucleoprotein D1 polypeptide, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPD1, Length 4,909 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD1-201ENST00000300413 ZSWIM1Q9BR11 485 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 HEMGNQ9BXL5 484 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 CNOT10Q9H9A5 744 aaKnown RBP8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 CALCOCO1Q9P1Z2 691 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 TLK1Q9UKI8 766 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 IPPQ9Y573 584 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 EBAG9O00559 213 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 TSPAN1O60635 241 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 AOC2O75106 756 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 RNF40O75150 1001 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 STX2P32856 288 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 MTF1Q14872 753 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 BBS9Q3SYG4 887 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 NPLOC4Q8TAT6 608 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 UCMAQ8WVF2 138 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 NUDCD1Q96RS6 583 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 DYRK4Q9NR20 520 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 DDIT4Q9NX09 232 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 KRT38O76015 456 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 HPDP32754 393 aaPredicted RBP8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 PPP3CAQ08209 521 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 MCOLN2Q8IZK6 566 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 EXD1Q8NHP7 514 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 SCG3Q8WXD2 468 aaKnown RBP8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 TATDN2Q93075 761 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 SPON2Q9BUD6 331 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 FAM170AA1A519 330 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 F5H5T6 163 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 TREHO43280 583 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 CSDE1O75534 798 aaKnown RBP8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 VIMP08670 466 aaKnown RBP8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 ITIH2P19823 946 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 HNRNPH3P31942 346 aaKnown RBP8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 CBX1P83916 185 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 FAM71AQ8IYT1 594 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 LZTR1Q8N653 840 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 SPATA4Q8NEY3 305 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 C11orf49Q9H6J7 331 aa8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 SLTMQ9NWH9 1034 aaKnown RBP eCLIP8.69□□□□□ -1.02
SNRPD1-201ENST00000300413 C3orf70A6NLC5 250 aaPredicted RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 M0QYT0 321 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 PJA2O43164 708 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 YWHAQP27348 245 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 TKTL1P51854 596 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 AP1B1Q10567 949 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 SKIV2LQ15477 1246 aaKnown RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 PSRC1Q6PGN9 363 aaPredicted RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 ZNF571Q7Z3V5 609 aaPredicted RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 DDX42Q86XP3 938 aaKnown RBP eCLIP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 ATP11CQ8NB49 1132 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 C3orf20Q8ND61 904 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 THAP2Q9H0W7 228 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 PDZD7Q9H5P4 517 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 CYLDQ9NQC7 956 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 XPNPEP1Q9NQW7 623 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 PADI3Q9ULW8 664 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 ATP1A1P05023 1023 aaKnown RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 ADH1AP07327 375 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 NFICP08651 508 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 PTPN1P18031 435 aaKnown RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 PMLP29590 882 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 CBWD6Q4V339 395 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 CBWD3Q5JTY5 395 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 CBWD5Q5RIA9 395 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 EEF1DP3Q658K8 133 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 KLC3Q6P597 504 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 HELQQ8TDG4 1101 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 TRAIPQ9BWF2 469 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 BTNL10A8MVZ5 291 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 SYN3O14994 580 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 NNTQ13423 1086 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 EPC2Q52LR7 807 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 ZNF662Q6ZS27 426 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 SLFN11Q7Z7L1 901 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 SPPL2BQ8TCT7 592 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 RIN2Q8WYP3 895 aaPredicted RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 NSMCE4AQ9NXX6 385 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 ARHGAP20Q9P2F6 1191 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 ATP8A1Q9Y2Q0 1164 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 SLC4A7Q9Y6M7 1214 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 EXOC1LA0A1B0GW35 172 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 IGF2BP3O00425 579 aaKnown RBP eCLIP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 DNM1LO00429 736 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 MICAL2O94851 1124 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 GLI1P08151 1106 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 CSH1P0DML2 217 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 CSH2P0DML3 217 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 CCR1P32246 355 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 FDFT1P37268 417 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 YWHAZP63104 245 aaKnown RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 KCNA1Q09470 495 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 ZNF177Q13360 481 aaPredicted RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 SEPT6Q14141 434 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 MAP7D1Q3KQU3 841 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 TAF1BQ53T94 588 aaPredicted RBP8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 CCDC121Q6ZUS5 278 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 PID1Q7Z2X4 250 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 ARHGEF19Q8IW93 802 aa8.68□□□□□ -1.02
SNRPD1-201ENST00000300413 MRRFQ96E11 262 aaKnown RBP8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms