RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 LBHD1Q9BQE6 289 aaPredicted RBP26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 KIAA1671Q9BY89 1806 aa26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 MRPL47Q9HD33 250 aaKnown RBP26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 ABCB6Q9NP58 842 aa26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 CYLDQ9NQC7 956 aa26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 PARVAQ9NVD7 372 aa26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 INSL6Q9Y581 213 aa26.01■■□□□ 1.75
GTF2A1-201ENST00000298173 BUB1BO60566 1050 aaPredicted RBP26■■□□□ 1.75
GTF2A1-201ENST00000298173 BEST1O76090 585 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 LINC00271P0C7V0 271 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 PLA2G4AP47712 749 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 TSPY1Q01534 308 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 MAPRE1Q15691 268 aaKnown RBP26■■□□□ 1.75
GTF2A1-201ENST00000298173 RTP2Q5QGT7 225 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 PPP1R15BQ5SWA1 713 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 CYP4A22Q5TCH4 519 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 CLEC20AQ6ZU45 233 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 CEP57Q86XR8 500 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 XYLT1Q86Y38 959 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 COLGALT1Q8NBJ5 622 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 MSANTD4Q8NCY6 345 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 C3orf20Q8ND61 904 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 B3GALT6Q96L58 329 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 SLC9A7Q96T83 725 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 NAPGQ99747 312 aaPredicted RBP26■■□□□ 1.75
GTF2A1-201ENST00000298173 WDR35Q9P2L0 1181 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 SLC4A7Q9Y6M7 1214 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 SCINQ9Y6U3 715 aa26■■□□□ 1.75
GTF2A1-201ENST00000298173 CTAGE9A4FU28 777 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 CCDC85CA6NKD9 419 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 XPO1O14980 1071 aaKnown RBP25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 NPR3P17342 541 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 SPOUT1Q5T280 376 aaKnown RBP25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 FAM35AQ86V20 835 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 HERC6Q8IVU3 1022 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 MYLPFQ96A32 169 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 MCRS1Q96EZ8 462 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 HSFY1Q96LI6 401 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 TTPALQ9BTX7 342 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 CHST7Q9NS84 486 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 SP7Q8TDD2 431 aaPredicted RBP25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 MED10Q9BTT4 135 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 MIS12Q9H081 205 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 CSNK1G1Q9HCP0 422 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 ST7Q9NRC1 585 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 TMEM30AQ9NV96 361 aa25.99■■□□□ 1.75
GTF2A1-201ENST00000298173 E5RJQ4 531 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 ENC1O14682 589 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 FAM200BP0CF97 657 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 RGS7P49802 495 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 CTXN3Q4LDR2 81 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 PAPD7Q5XG87 772 aaKnown RBP25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 ZMIZ2Q8NF64 920 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 FEZF2Q8TBJ5 459 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 KCTD13Q8WZ19 329 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 SMOQ99835 787 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 UBXN6Q9BZV1 441 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 GOLPH3Q9H4A6 298 aa25.98■■□□□ 1.75
GTF2A1-201ENST00000298173 OR6C75A6NL08 312 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 SIGLEC16A6NMB1 481 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 ATP1A1P05023 1023 aaKnown RBP25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 USP41Q3LFD5 358 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 MEI1Q5TIA1 1274 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 ZNF280DQ6N043 979 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 C11orf63Q6NUN7 778 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 ANKS3Q6ZW76 656 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 PIGZQ86VD9 579 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 DCP1BQ8IZD4 617 aaKnown RBP25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 SYCE1Q8N0S2 351 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 IPO4Q8TEX9 1081 aaKnown RBP25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 CLP1Q92989 425 aaKnown RBP25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 SMARCD1Q96GM5 515 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 RAD9AQ99638 391 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 TLR10Q9BXR5 811 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 OXCT2Q9BYC2 517 aaPredicted RBP25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 TRIM7Q9C029 511 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 SYNCQ9H7C4 482 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 KRT82Q9NSB4 513 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 SPG21Q9NZD8 308 aa25.97■■□□□ 1.75
GTF2A1-201ENST00000298173 TMEM191CA6NGB0 347 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 CACNA2D1P54289 1103 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 SLC8A3P57103 927 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 SNX16P57768 344 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 RPL7AP62424 266 aaKnown RBP25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 DAAM2Q86T65 1068 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 NT5DC3Q86UY8 548 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 FIBCD1Q8N539 461 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 BTBD6Q96KE9 485 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 ZBED2Q9BTP6 218 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 ALG6Q9Y672 507 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 H7C4K7 107 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 AP1G2O75843 785 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 GJB6O95452 261 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 FTCDO95954 541 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 SOD2P04179 222 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 OR4Q2P0C623 313 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 ATP2A2P16615 1042 aaKnown RBP25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 ACADSBP45954 432 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 CDR1P51861 262 aa25.96■■□□□ 1.75
GTF2A1-201ENST00000298173 AMPD2Q01433 879 aa25.96■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms