RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 ZNF200P98182 395 aaPredicted RBP12.38□□□□□ -0.43
RHO-201ENST00000296271 TMED2Q15363 201 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 ACOT1Q86TX2 421 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 NPLOC4Q8TAT6 608 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 CABS1Q96KC9 395 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 PTPN18Q99952 460 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 WDR83Q9BRX9 315 aaKnown RBP12.38□□□□□ -0.43
RHO-201ENST00000296271 CITO14578 2027 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 IL18RAPO95256 599 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 ZKSCAN8Q15776 578 aaPredicted RBP12.38□□□□□ -0.43
RHO-201ENST00000296271 ZNF484Q5JVG2 852 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 MFSD5Q6N075 450 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 DPY19L2Q6NUT2 758 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 FAM183BPQ6ZVS7 135 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 USP50Q70EL3 339 aaPredicted RBP12.38□□□□□ -0.43
RHO-201ENST00000296271 DPP9Q86TI2 863 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 ZBED8Q8IZ13 594 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 PPTC7Q8NI37 304 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 THOC1Q96FV9 657 aaKnown RBP12.38□□□□□ -0.43
RHO-201ENST00000296271 CFAP57Q96MR6 1250 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 OSMRQ99650 979 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 ZNF518BQ9C0D4 1074 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 DPEP3Q9H4B8 488 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 CNOT10Q9H9A5 744 aaKnown RBP12.38□□□□□ -0.43
RHO-201ENST00000296271 KLK14Q9P0G3 267 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 CACNG4Q9UBN1 327 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 TSPAN16Q9UKR8 245 aa12.38□□□□□ -0.43
RHO-201ENST00000296271 TRIP12Q14669 1992 aaPredicted RBP12.38□□□□□ -0.43
RHO-201ENST00000296271 PLXNB2O15031 1838 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 KIAA0754O94854 1291 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 MCF2P10911 925 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 BRAFP15056 766 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 HOXA11P31270 313 aaPredicted RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 GCLCP48506 637 aaPredicted RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 ATXN1P54253 815 aaKnown RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 FNBP1LQ5T0N5 605 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 ZNF618Q5T7W0 954 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 PPP1R26Q5T8A7 1209 aaPredicted RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 OR6B2Q6IFH4 312 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 PMF1Q6P1K2 205 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 SYDE1Q6ZW31 735 aaPredicted RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 CYP4V2Q6ZWL3 525 aaPredicted RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 ZC3H18Q86VM9 953 aaKnown RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 FAM71DQ8N9W8 422 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 NETO2Q8NC67 525 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 SLC35B2Q8TB61 432 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 CLEC4CQ8WTT0 213 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 C12orf65Q9H3J6 166 aaKnown RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 GOLGA2P5Q9HBQ8 144 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 FGFR1OP2Q9NVK5 253 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 SNX9Q9Y5X1 595 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 C5orf60A6NFR6 353 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 TCP11X1B4DZS4 312 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 ZC3H12AQ5D1E8 599 aaKnown RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 RNASEH2BQ5TBB1 312 aaKnown RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 GPR142Q7Z601 462 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 RFX6Q8HWS3 928 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 SCUBE3Q8IX30 993 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 ZCCHC9Q8N567 271 aaKnown RBP12.37□□□□□ -0.43
RHO-201ENST00000296271 NIPA2Q8N8Q9 360 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 KCTD6Q8NC69 237 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 RXFP2Q8WXD0 754 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 ACAP3Q96P50 834 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 TSPYL1Q9H0U9 437 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 LHX5Q9H2C1 402 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 TMEM51Q9NW97 253 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 NR2E3Q9Y5X4 410 aa12.37□□□□□ -0.43
RHO-201ENST00000296271 A0A1B0GUA9 196 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 DYNC1LI2O43237 492 aaPredicted RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 MMP3P08254 477 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 SSTR1P30872 391 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 RPL22P35268 128 aaKnown RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 PDIA2Q13087 525 aaKnown RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 CA9Q16790 459 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 LRRC38Q5VT99 294 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 TTC30AQ86WT1 665 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 CACNA2D3Q8IZS8 1091 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 TMEM40Q8WWA1 233 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 SPOCK2Q92563 424 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 MAML3Q96JK9 1138 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 SERPINB12Q96P63 405 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 ADPGKQ9BRR6 497 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 MIS12Q9H081 205 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 NXF3Q9H4D5 531 aaKnown RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 VPS37BQ9H9H4 285 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 HOMER3Q9NSC5 361 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 TPX2Q9ULW0 747 aaKnown RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 USP18Q9UMW8 372 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 PPME1Q9Y570 386 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 TMEM63AO94886 807 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 PDGFRBP09619 1106 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 CTCFP49711 727 aaPredicted RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 GPX6P59796 221 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 MYO1EQ12965 1108 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 PKN2Q16513 984 aaKnown RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 FAM187BQ17R55 369 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 GOLGA7BQ2TAP0 167 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 GKAP1Q5VSY0 366 aaPredicted RBP12.36□□□□□ -0.43
RHO-201ENST00000296271 SCYL2Q6P3W7 929 aa12.36□□□□□ -0.43
RHO-201ENST00000296271 C1orf228Q6PIY5 440 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms