RNA–Protein interactions for RNA: ENST00000291547.9

PKNOX1-201, Transcript of PBX/knotted 1 homeobox 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKNOX1, Length 5,003 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-201ENST00000291547 SARSP49591 514 aaKnown RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 TRIM65Q6PJ69 517 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 C11orf74Q86VG3 221 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 TNIP3Q96KP6 325 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 DCDC2Q9UHG0 476 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 SNX13Q9Y5W8 968 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 RFX7Q2KHR2 1363 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 PHRF1Q9P1Y6 1649 aaKnown RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 PRDX5P30044 214 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 HSD17B3P37058 310 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 PPP3CCP48454 512 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 RGS7P49802 495 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 SLC16A1P53985 500 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 GRM4Q14833 912 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 NR1I3Q14994 352 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 ARHGEF6Q15052 776 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 QRICH1Q2TAL8 776 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 SPATA18Q8TC71 538 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 KRT35Q92764 455 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 SGF29Q96ES7 293 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 UBXN6Q9BZV1 441 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 ALDH8A1Q9H2A2 487 aaPredicted RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 DMAP1Q9NPF5 467 aaPredicted RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 APPL1Q9UKG1 709 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 PHTF1Q9UMS5 762 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 WDR37Q9Y2I8 494 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 PRG3Q9Y2Y8 225 aaPredicted RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 ALG6Q9Y672 507 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 CCDC189A1A4V9 331 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 RGL2O15211 777 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 ARMCX4Q5H9R4 360 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 FAM180AQ6UWF9 173 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 DEFB132Q7Z7B7 95 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 COL23A1Q86Y22 540 aaPredicted RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 LRRN4CLQ8ND94 238 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 PABPC5Q96DU9 382 aaKnown RBP11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 MCEEQ96PE7 176 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 DCLRE1BQ9H816 532 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 CD209Q9NNX6 404 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 PRKAG2Q9UGJ0 569 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 FBXO40Q9UH90 709 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 SLC39A10Q9ULF5 831 aa11.16□□□□□ -0.62
PKNOX1-201ENST00000291547 ASMTLO95671 621 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 EYA4O95677 639 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 AKT1P31749 480 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 PTPN7P35236 360 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 SOX6P35712 828 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 SULT1E1P49888 294 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 RAB27AP51159 221 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 TNIP2Q8NFZ5 429 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 ANKS1AQ92625 1134 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 FAM84BQ96KN1 310 aaPredicted RBP11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 FAM111AQ96PZ2 611 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 VPS33BQ9H267 617 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 POLE3Q9NRF9 147 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 CLCA2Q9UQC9 943 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 TMEM191CA6NGB0 347 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 SLC16A3O15427 465 aaKnown RBP11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 TFE3P19532 575 aaPredicted RBP11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 CASP7P55210 303 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 SYTL3Q4VX76 610 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 SNRNP48Q6IEG0 339 aaKnown RBP11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 PTF1AQ7RTS3 328 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 TBC1D19Q8N5T2 526 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 FOPNLQ96NB1 174 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 RNF146Q9NTX7 359 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 PNMA8BQ9ULN7 279 aaPredicted RBP11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 SMAPO00193 183 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 CST8O60676 142 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 MYCP01106 439 aaPredicted RBP11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 FMO5P49326 533 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 PIGHQ14442 188 aaPredicted RBP11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 EFHBQ8N7U6 833 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 CALML6Q8TD86 181 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 ZNF669Q96BR6 464 aaPredicted RBP11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 ZNF560Q96MR9 790 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 SERPINB12Q96P63 405 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 NRDE2Q9H7Z3 1164 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 PARVBQ9HBI1 364 aa11.15□□□□□ -0.62
PKNOX1-201ENST00000291547 PLSCR1O15162 318 aa11.15□□□□□ -0.63
PKNOX1-201ENST00000291547 RSBN1Q5VWQ0 802 aaPredicted RBP11.15□□□□□ -0.63
PKNOX1-201ENST00000291547 EFL1Q7Z2Z2 1120 aaKnown RBP11.15□□□□□ -0.63
PKNOX1-201ENST00000291547 OR8H2Q8N162 312 aa11.15□□□□□ -0.63
PKNOX1-201ENST00000291547 ATPAF2Q8N5M1 289 aa11.15□□□□□ -0.63
PKNOX1-201ENST00000291547 GOLPH3Q9H4A6 298 aa11.15□□□□□ -0.63
PKNOX1-201ENST00000291547 KLHL31Q9H511 634 aa11.15□□□□□ -0.63
PKNOX1-201ENST00000291547 C6orf203Q9P0P8 240 aaPredicted RBP11.15□□□□□ -0.63
PKNOX1-201ENST00000291547 MKL2Q9ULH7 1088 aa11.15□□□□□ -0.63
PKNOX1-201ENST00000291547 IQCA1LA6NCM1 817 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 TRPC5OSA6NMA1 111 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 F8W810 466 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 PGK2P07205 417 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 PSMA3P25788 255 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 KLRC1P26715 233 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 SOAT1P35610 550 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 GEMIN4P57678 1058 aaKnown RBP11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 DMPKQ09013 629 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 SCARF1Q14162 830 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 ELMOD1Q8N336 334 aa11.14□□□□□ -0.63
PKNOX1-201ENST00000291547 RSPH1Q8WYR4 309 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms