RNA–Protein interactions for RNA: ENST00000288840.9

SMAD6-201, Transcript of SMAD family member 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD6, Length 3,835 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD6-201ENST00000288840 ZNF317Q96PQ6 595 aaPredicted RBP16.64■□□□□ 0.25
SMAD6-201ENST00000288840 ARHGAP28Q9P2N2 729 aa16.64■□□□□ 0.25
SMAD6-201ENST00000288840 LRRC36Q1X8D7 754 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 KLHL38Q2WGJ6 581 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 TREML2Q5T2D2 321 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 ANKRD22Q5VYY1 191 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 CCDC125Q86Z20 511 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 UNC45BQ8IWX7 931 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 LMNTD2Q8IXW0 634 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 KATNAL2Q8IYT4 538 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 DDX1Q92499 740 aaKnown RBP16.63■□□□□ 0.25
SMAD6-201ENST00000288840 TTC1Q99614 292 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 EPB41L4BQ9H329 900 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 CIB2O75838 187 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 NPTXRO95502 500 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 NFICP08651 508 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 BGNP21810 368 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 ALDH18A1P54886 795 aaKnown RBP16.63■□□□□ 0.25
SMAD6-201ENST00000288840 ZNF200P98182 395 aaPredicted RBP16.63■□□□□ 0.25
SMAD6-201ENST00000288840 NR1H3Q13133 447 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 TFDP2Q14188 446 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 PLCB4Q15147 1175 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 SURF1Q15526 300 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 FAM161BQ96MY7 647 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 ACAP3Q96P50 834 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 MMP19Q99542 508 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 CYP4F11Q9HBI6 524 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 FIS1Q9Y3D6 152 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 BTAF1O14981 1849 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 KRT37O76014 449 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 NCF2P19878 526 aaPredicted RBP16.63■□□□□ 0.25
SMAD6-201ENST00000288840 PHKA2P46019 1235 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 MXD4Q14582 209 aaPredicted RBP16.63■□□□□ 0.25
SMAD6-201ENST00000288840 SLC1A5Q15758 541 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 IER5Q5VY09 327 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 PCGF5Q86SE9 256 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 TMEM192Q8IY95 271 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 CENPTQ96BT3 561 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 KLC2Q9H0B6 622 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 VPS11Q9H270 941 aa16.63■□□□□ 0.25
SMAD6-201ENST00000288840 SPDYE16A6NNV3 312 aaPredicted RBP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 STAG3L1P0CL83 205 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 EPHB1P54762 984 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 AP1B1Q10567 949 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 R3HDM1Q15032 1099 aaKnown RBP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 KIZQ2M2Z5 673 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 PTPN20Q4JDL3 420 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 FKBP1CQ5VVH2 108 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 NUDCD3Q8IVD9 361 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 ARID3BQ8IVW6 561 aaPredicted RBP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 ZCCHC9Q8N567 271 aaKnown RBP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 FAM167AQ96KS9 214 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 SYT11Q9BT88 431 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 YIPF3Q9GZM5 350 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 MANSC1Q9H8J5 431 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 AAASQ9NRG9 546 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 HES2Q9Y543 173 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 A0A0B4J269 797 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 ZNF286BP0CG31 522 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 FOXN2P32314 431 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 GDF10P55107 478 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 SLC8A3P57103 927 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 NCALDP61601 193 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 TGFB2P61812 414 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 XRRA1Q6P2D8 792 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 TAS1R3Q7RTX0 852 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 BRSK2Q8IWQ3 736 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 C7orf43Q8WVR3 580 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 SMG5Q9UPR3 1016 aaKnown RBP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 COQ4Q9Y3A0 265 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 NR2E3Q9Y5X4 410 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 KBTBD13C9JR72 458 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 ONECUT3O60422 494 aaPredicted RBP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 MMP8P22894 467 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 RPL22P35268 128 aaKnown RBP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 PTPN11Q06124 597 aaPredicted RBP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 SH3PXD2AQ5TCZ1 1133 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 C6orf89Q6UWU4 347 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 CD101Q93033 1021 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 RXFP1Q9HBX9 757 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 ZNF214Q9UL59 606 aaPredicted RBP16.62■□□□□ 0.25
SMAD6-201ENST00000288840 INPP5FQ9Y2H2 1132 aa16.62■□□□□ 0.25
SMAD6-201ENST00000288840 ABCD1P33897 745 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 CRADDP78560 199 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 TMEM132DQ14C87 1099 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 KDELC2Q7Z4H8 507 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 APOBEC3FQ8IUX4 373 aaKnown RBP16.61■□□□□ 0.25
SMAD6-201ENST00000288840 SPDL1Q96EA4 605 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 TMEM191CA6NGB0 347 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 CLGNO14967 610 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 FAM155BO75949 473 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 FAAP100Q0VG06 881 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 MORF4L2Q15014 288 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 KBTBD12Q3ZCT8 623 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 ZCCHC23Q6ZST2 131 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 CPXM1Q96SM3 734 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 SYNPO2Q9UMS6 1093 aa16.61■□□□□ 0.25
SMAD6-201ENST00000288840 LACTBL1A8MY62 500 aa16.61■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms