RNA–Protein interactions for RNA: ENST00000287814.4

TIMP4-201, Transcript of TIMP metallopeptidase inhibitor 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TIMP4, Length 1,650 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4-201ENST00000287814 MRPS23Q9Y3D9 190 aaKnown RBP21.12■□□□□ 0.97
TIMP4-201ENST00000287814 NR2E1Q9Y466 385 aa21.12■□□□□ 0.97
TIMP4-201ENST00000287814 RNF225M0QZC1 329 aaPredicted RBP21.11■□□□□ 0.97
TIMP4-201ENST00000287814 PES1O00541 588 aaKnown RBP21.11■□□□□ 0.97
TIMP4-201ENST00000287814 CEBPBP17676 345 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 GBP2P32456 591 aaPredicted RBP21.11■□□□□ 0.97
TIMP4-201ENST00000287814 SSTR3P32745 418 aaPredicted RBP21.11■□□□□ 0.97
TIMP4-201ENST00000287814 VEPH1Q14D04 833 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 CYP4A22Q5TCH4 519 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 GAREM2Q75VX8 874 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 PDZD4Q76G19 769 aaPredicted RBP21.11■□□□□ 0.97
TIMP4-201ENST00000287814 OTOP3Q7RTS5 596 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 ITIH5Q86UX2 942 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 TTC39CQ8N584 583 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 TDRD5Q8NAT2 981 aaKnown RBP21.11■□□□□ 0.97
TIMP4-201ENST00000287814 FGF13Q92913 245 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 CYFIP2Q96F07 1278 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 HEXIM2Q96MH2 286 aaKnown RBP21.11■□□□□ 0.97
TIMP4-201ENST00000287814 MED10Q9BTT4 135 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 IL21Q9HBE4 155 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 CBX8Q9HC52 389 aa21.11■□□□□ 0.97
TIMP4-201ENST00000287814 LRRC10BA6NIK2 292 aa21.1■□□□□ 0.97
TIMP4-201ENST00000287814 SLC38A8A6NNN8 435 aa21.1■□□□□ 0.97
TIMP4-201ENST00000287814 BEST1O76090 585 aa21.1■□□□□ 0.97
TIMP4-201ENST00000287814 COPB1P53618 953 aaKnown RBP21.1■□□□□ 0.97
TIMP4-201ENST00000287814 PPP1R26Q5T8A7 1209 aaPredicted RBP21.1■□□□□ 0.97
TIMP4-201ENST00000287814 NPAS3Q8IXF0 933 aa21.1■□□□□ 0.97
TIMP4-201ENST00000287814 ST13P5Q8NFI4 369 aaPredicted RBP21.1■□□□□ 0.97
TIMP4-201ENST00000287814 SHKBP1Q8TBC3 707 aa21.1■□□□□ 0.97
TIMP4-201ENST00000287814 C8orf48Q96LL4 319 aa21.1■□□□□ 0.97
TIMP4-201ENST00000287814 HNRNPABQ99729 332 aaKnown RBP21.1■□□□□ 0.97
TIMP4-201ENST00000287814 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP21.1■□□□□ 0.97
TIMP4-201ENST00000287814 AJAP1Q9UKB5 411 aaPredicted RBP21.1■□□□□ 0.97
TIMP4-201ENST00000287814 CDH7Q9ULB5 785 aa21.1■□□□□ 0.97
TIMP4-201ENST00000287814 PTPRDP23468 1912 aa21.1■□□□□ 0.97
TIMP4-201ENST00000287814 SMTNL1A8MU46 457 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 CDK11BP21127 795 aaKnown RBP21.09■□□□□ 0.97
TIMP4-201ENST00000287814 ADORA2BP29275 332 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 TMEM270Q6UE05 265 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 ZDHHC14Q8IZN3 488 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 ZMIZ2Q8NF64 920 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 KHSRPQ92945 711 aaKnown RBP eCLIP21.09■□□□□ 0.97
TIMP4-201ENST00000287814 ACSF2Q96CM8 615 aaPredicted RBP21.09■□□□□ 0.97
TIMP4-201ENST00000287814 SPATA17Q96L03 361 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 SMOQ99835 787 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 APEX2Q9UBZ4 518 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 LIMD1Q9UGP4 676 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 MAGED2Q9UNF1 606 aaPredicted RBP21.09■□□□□ 0.97
TIMP4-201ENST00000287814 PCDHB4Q9Y5E5 795 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 A0A1W2PRU2 124 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 AP1G2O75843 785 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 NOL4O94818 638 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 CALCAP01258 141 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 CSH1P0DML2 217 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 CSH2P0DML3 217 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 LAMP2P13473 410 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 USP46P62068 366 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 YWHAEP62258 255 aaKnown RBP21.09■□□□□ 0.97
TIMP4-201ENST00000287814 TMEM150AQ86TG1 271 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 LUZP1Q86V48 1076 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 RNF135Q8IUD6 432 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 LEMD2Q8NC56 503 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 MCRS1Q96EZ8 462 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 KRT82Q9NSB4 513 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 EPS15L1Q9UBC2 864 aa21.09■□□□□ 0.97
TIMP4-201ENST00000287814 DOCK8Q8NF50 2099 aa21.08■□□□□ 0.97
TIMP4-201ENST00000287814 ZNF197O14709 1029 aa21.08■□□□□ 0.96
TIMP4-201ENST00000287814 TRIM66O15016 1216 aa21.08■□□□□ 0.96
TIMP4-201ENST00000287814 GABRR2P28476 465 aa21.08■□□□□ 0.96
TIMP4-201ENST00000287814 TEAD2Q15562 447 aa21.08■□□□□ 0.96
TIMP4-201ENST00000287814 SMARCD1Q96GM5 515 aa21.08■□□□□ 0.96
TIMP4-201ENST00000287814 ZSWIM3Q96MP5 696 aa21.08■□□□□ 0.96
TIMP4-201ENST00000287814 CSNK1G1Q9HCP0 422 aa21.08■□□□□ 0.96
TIMP4-201ENST00000287814 NCOR1O75376 2440 aa21.08■□□□□ 0.96
TIMP4-201ENST00000287814 MICAL2O94851 1124 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 F11P03951 625 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 KLK7P49862 253 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 MAP3K7CLP57077 242 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 TAF12Q16514 161 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 STXBP5Q5T5C0 1151 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 PLCD3Q8N3E9 789 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 TFAP2BQ92481 460 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 MYRFLQ96LU7 910 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 ZSWIM1Q9BR11 485 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 CNTN6Q9UQ52 1028 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 ATP8B3O60423 1300 aa21.07■□□□□ 0.96
TIMP4-201ENST00000287814 BECN2A8MW95 431 aa21.06■□□□□ 0.96
TIMP4-201ENST00000287814 ASGR2P07307 311 aa21.06■□□□□ 0.96
TIMP4-201ENST00000287814 ANXA13P27216 316 aa21.06■□□□□ 0.96
TIMP4-201ENST00000287814 ZNF132P52740 706 aa21.06■□□□□ 0.96
TIMP4-201ENST00000287814 ARHGAP44Q17R89 818 aa21.06■□□□□ 0.96
TIMP4-201ENST00000287814 ARHGAP17Q68EM7 881 aa21.06■□□□□ 0.96
TIMP4-201ENST00000287814 CLEC20AQ6ZU45 233 aa21.06■□□□□ 0.96
TIMP4-201ENST00000287814 RBBP8NLQ8NC74 664 aaPredicted RBP21.06■□□□□ 0.96
TIMP4-201ENST00000287814 ATXN3LQ9H3M9 355 aa21.06■□□□□ 0.96
TIMP4-201ENST00000287814 DMAP1Q9NPF5 467 aaPredicted RBP21.06■□□□□ 0.96
TIMP4-201ENST00000287814 DNAJC12Q9UKB3 198 aa21.06■□□□□ 0.96
TIMP4-201ENST00000287814 BDP1A6H8Y1 2624 aa21.06■□□□□ 0.96
TIMP4-201ENST00000287814 LGALS16A8MUM7 142 aa21.05■□□□□ 0.96
TIMP4-201ENST00000287814 TNFRSF10BO14763 440 aa21.05■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms