RNA–Protein interactions for RNA: ENST00000279550.11

YBX3-202, Transcript of Y-box binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene YBX3, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-202ENST00000279550 ERP44Q9BS26 406 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 TANC1Q9C0D5 1861 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 MED4Q9NPJ6 270 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 ARL5CA6NH57 179 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 F8VP50 259 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 M0QYV0 167 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 HSPA9P38646 679 aaKnown RBP22.11■■□□□ 1.13
YBX3-202ENST00000279550 KCNJ1P48048 391 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 MYO1EQ12965 1108 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 CNGA2Q16280 664 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 ATP13A4Q4VNC1 1196 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 C9orf57Q5W0N0 161 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 DCUN1D2Q6PH85 259 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 CCDC137Q6PK04 289 aaKnown RBP22.11■■□□□ 1.13
YBX3-202ENST00000279550 ZNF598Q86UK7 904 aaKnown RBP22.11■■□□□ 1.13
YBX3-202ENST00000279550 XYLT1Q86Y38 959 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 JOSD2Q8TAC2 188 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 UBA3Q8TBC4 463 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP22.11■■□□□ 1.13
YBX3-202ENST00000279550 SEPT8Q92599 483 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 APBB2Q92870 758 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 PPP1R10Q96QC0 940 aaKnown RBP22.11■■□□□ 1.13
YBX3-202ENST00000279550 RAB17Q9H0T7 212 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 RSAD1Q9HA92 442 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 FAM114A2Q9NRY5 505 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 KLHL11Q9NVR0 708 aa22.11■■□□□ 1.13
YBX3-202ENST00000279550 SBDSQ9Y3A5 250 aaKnown RBP eCLIP22.11■■□□□ 1.13
YBX3-202ENST00000279550 CXCL10P02778 98 aa22.1■■□□□ 1.13
YBX3-202ENST00000279550 IBSPP21815 317 aaPredicted RBP22.1■■□□□ 1.13
YBX3-202ENST00000279550 PSMC1P62191 440 aaKnown RBP22.1■■□□□ 1.13
YBX3-202ENST00000279550 SGO2Q562F6 1265 aa22.1■■□□□ 1.13
YBX3-202ENST00000279550 HSP90B2PQ58FF3 399 aa22.1■■□□□ 1.13
YBX3-202ENST00000279550 FAM43BQ6ZT52 329 aaPredicted RBP22.1■■□□□ 1.13
YBX3-202ENST00000279550 DPH6Q7L8W6 267 aa22.1■■□□□ 1.13
YBX3-202ENST00000279550 VPS18Q9P253 973 aa22.1■■□□□ 1.13
YBX3-202ENST00000279550 R3HDM2Q9Y2K5 976 aaKnown RBP22.1■■□□□ 1.13
YBX3-202ENST00000279550 SNX9Q9Y5X1 595 aa22.1■■□□□ 1.13
YBX3-202ENST00000279550 RALAP11233 206 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 EN2P19622 333 aaPredicted RBP22.09■■□□□ 1.13
YBX3-202ENST00000279550 RFC1P35251 1148 aaPredicted RBP22.09■■□□□ 1.13
YBX3-202ENST00000279550 GPD2P43304 727 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 AFF1P51825 1210 aaKnown RBP22.09■■□□□ 1.13
YBX3-202ENST00000279550 FAM189BP81408 668 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 TAP1Q03518 808 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 TXNRD3NBQ6F5E7 133 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 LRRC52Q8N7C0 313 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 ATG4AQ8WYN0 398 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 ZIM3Q96PE6 472 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 PLVAPQ9BX97 442 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 NT5C1AQ9BXI3 368 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 HEMGNQ9BXL5 484 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 LRRC19Q9H756 370 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 UBN1Q9NPG3 1134 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 CHST7Q9NS84 486 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 STRIP2Q9ULQ0 834 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 SNX24Q9Y343 169 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 PI4K2BG5E9Z4 385 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 RNF40O75150 1001 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 EOMESO95936 686 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 PFKMP08237 780 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 SOX4Q06945 474 aaPredicted RBP22.09■■□□□ 1.13
YBX3-202ENST00000279550 PDCLQ13371 301 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 ALS2CLQ60I27 953 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 UBE2Q1Q7Z7E8 422 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 CCDC50Q8IVM0 306 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 IQCKQ8N0W5 287 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 C12orf29Q8N999 325 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 ZDHHC18Q9NUE0 388 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 SLC38A7Q9NVC3 462 aa22.09■■□□□ 1.13
YBX3-202ENST00000279550 SIGLEC16A6NMB1 481 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 HSF2BPO75031 334 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 THP07101 528 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 FNTAP49354 379 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 SNX1Q13596 522 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 LCLAT1Q6UWP7 414 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 ZDHHC24Q6UX98 284 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 NIPA2Q8N8Q9 360 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 EXD1Q8NHP7 514 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 RNF25Q96BH1 459 aaPredicted RBP22.08■■□□□ 1.12
YBX3-202ENST00000279550 SH3GL2Q99962 352 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 LPIN3Q9BQK8 851 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 FAM124BQ9H5Z6 455 aaPredicted RBP22.08■■□□□ 1.12
YBX3-202ENST00000279550 GOLGA2P5Q9HBQ8 144 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 METTL5Q9NRN9 209 aaKnown RBP22.08■■□□□ 1.12
YBX3-202ENST00000279550 MIOSQ9NXC5 875 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 GRHL1Q9NZI5 618 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 RASAL2Q9UJF2 1139 aa22.08■■□□□ 1.12
YBX3-202ENST00000279550 PIRO00625 290 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 SPTLC1O15269 473 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 HCRTO43612 131 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 RPL21P46778 160 aaKnown RBP22.07■■□□□ 1.12
YBX3-202ENST00000279550 GABRB2P47870 512 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 SCNN1GP51170 649 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 GSCP56915 257 aaPredicted RBP22.07■■□□□ 1.12
YBX3-202ENST00000279550 KLF1Q13351 362 aaPredicted RBP22.07■■□□□ 1.12
YBX3-202ENST00000279550 UAP1Q16222 522 aaPredicted RBP22.07■■□□□ 1.12
YBX3-202ENST00000279550 GOLGA7BQ2TAP0 167 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 CFAP58Q5T655 872 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 ACOT1Q86TX2 421 aa22.07■■□□□ 1.12
YBX3-202ENST00000279550 CCDC105Q8IYK2 499 aa22.07■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms