RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 SPTLC1O15269 473 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 MAP3K6O95382 1288 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 TM4SF4P48230 202 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 INHBEP58166 350 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 C12orf50Q8NA57 414 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-201ENST00000279247 MAIP1Q8WWC4 291 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 TMBIM4Q9HC24 238 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 NGRNQ9NPE2 291 aaKnown RBP18.88■□□□□ 0.61
CAPN1-201ENST00000279247 MYCP01106 439 aaPredicted RBP18.88■□□□□ 0.61
CAPN1-201ENST00000279247 AKR1A1P14550 325 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 PDGFRAP16234 1089 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 ACTN2P35609 894 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 AFF1P51825 1210 aaKnown RBP18.88■□□□□ 0.61
CAPN1-201ENST00000279247 SOWAHAQ2M3V2 549 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 C9orf57Q5W0N0 161 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 TRIB2Q92519 343 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 USP6NLQ92738 828 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 LPPQ93052 612 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 CFAP57Q96MR6 1250 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 GPATCH2LQ9NWQ4 482 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 IPPQ9Y573 584 aa18.88■□□□□ 0.61
CAPN1-201ENST00000279247 RNF8O76064 485 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 TJP3O95049 919 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 ACAT1P24752 427 aaKnown RBP18.87■□□□□ 0.61
CAPN1-201ENST00000279247 MIPP30301 263 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 NBPF20Q3BBV1 942 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 CAPN12Q6ZSI9 719 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 APBB1IPQ7Z5R6 666 aaPredicted RBP18.87■□□□□ 0.61
CAPN1-201ENST00000279247 TTC30AQ86WT1 665 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 KCTD6Q8NC69 237 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 WNT8BQ93098 351 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 ANAPC5Q9UJX4 755 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 CAND2O75155 1236 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 MAN1A1P33908 653 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 MAGOHP61326 146 aaKnown RBP18.87■□□□□ 0.61
CAPN1-201ENST00000279247 EPS8L3Q8TE67 593 aaKnown RBP18.87■□□□□ 0.61
CAPN1-201ENST00000279247 LRRN4Q8WUT4 740 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 RXFP2Q8WXD0 754 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 EPB41L4BQ9H329 900 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 PABPC3Q9H361 631 aaKnown RBP18.87■□□□□ 0.61
CAPN1-201ENST00000279247 SGK1O00141 431 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 CST8O60676 142 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 HMGCRP04035 888 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 DRG2P55039 364 aaKnown RBP18.87■□□□□ 0.61
CAPN1-201ENST00000279247 ADAM17P78536 824 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 MMRN1Q13201 1228 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 BYSLQ13895 437 aaKnown RBP18.87■□□□□ 0.61
CAPN1-201ENST00000279247 P3H1Q32P28 736 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 TFDP3Q5H9I0 405 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 FBXO47Q5MNV8 452 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 SYCP2LQ5T4T6 812 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 CLEC4CQ8WTT0 213 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 ART4Q93070 314 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 SNF8Q96H20 258 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 VRTNQ9H8Y1 702 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 PSD3Q9NYI0 1048 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 HESX1Q9UBX0 185 aa18.87■□□□□ 0.61
CAPN1-201ENST00000279247 FGFR1P11362 822 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 LCP1P13796 627 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 RABGGTBP53611 331 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 NRLP54845 237 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 CCNG2Q16589 344 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 HADHQ16836 314 aaKnown RBP18.86■□□□□ 0.61
CAPN1-201ENST00000279247 TRNP1Q6NT89 227 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 LRRC31Q6UY01 552 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 ZNF784Q8NCA9 323 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-201ENST00000279247 GRK7Q8WTQ7 553 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 SOCS4Q8WXH5 440 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 OSBPL7Q9BZF2 842 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 CDY2AQ9Y6F7 541 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 GOLGA8MH3BSY2 632 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 HAS3O00219 553 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 PFKMP08237 780 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 IRAK1P51617 712 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 TAP1Q03518 808 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 INCA1Q0VD86 236 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 CCDC38Q502W7 563 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 IZUMO3Q5VZ72 239 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 FAM228AQ86W67 206 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 RFX6Q8HWS3 928 aa18.86■□□□□ 0.61
CAPN1-201ENST00000279247 UBQLN1Q9UMX0 589 aaKnown RBP18.86■□□□□ 0.61
CAPN1-201ENST00000279247 TIMM13Q9Y5L4 95 aaPredicted RBP18.86■□□□□ 0.61
CAPN1-201ENST00000279247 hCG_1818297A0A087WSY0 165 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 ATP2C2O75185 946 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 KYNUQ16719 465 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 UBXN11Q5T124 520 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 CD302Q8IX05 232 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 NDRG1Q92597 394 aaKnown RBP18.85■□□□□ 0.61
CAPN1-201ENST00000279247 C9orf72Q96LT7 481 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 RUNDC3BQ96NL0 473 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 PLEKHA5Q9HAU0 1116 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 RNF186Q9NXI6 227 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 KPNA7A9QM74 516 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 CDKN2BP42772 138 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 ARSEP51690 589 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 SLC25A11Q02978 314 aaKnown RBP18.85■□□□□ 0.61
CAPN1-201ENST00000279247 GDF6Q6KF10 455 aaPredicted RBP18.85■□□□□ 0.61
CAPN1-201ENST00000279247 LCLAT1Q6UWP7 414 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 KATNAL1Q9BW62 490 aa18.85■□□□□ 0.61
CAPN1-201ENST00000279247 CDC42EP4Q9H3Q1 356 aaKnown RBP18.85■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms