RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 RAPH1Q70E73 1250 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 ANO5Q75V66 913 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 SCUBE1Q8IWY4 988 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 SP8Q8IXZ3 490 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 EMC1Q8N766 993 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 CCDC110Q8TBZ0 833 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 ZNF526Q8TF50 670 aaPredicted RBP13.52□□□□□ -0.25
COL8A1-202ENST00000273342 TRIM11Q96F44 468 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 RBM41Q96IZ5 413 aaKnown RBP13.52□□□□□ -0.25
COL8A1-202ENST00000273342 EBF3Q9H4W6 596 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 CYP4F11Q9HBI6 524 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 ARHGEF4Q9NR80 690 aa13.52□□□□□ -0.25
COL8A1-202ENST00000273342 MTO1Q9Y2Z2 717 aaKnown RBP13.52□□□□□ -0.25
COL8A1-202ENST00000273342 hCG_1818297A0A087WSY0 165 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 KBTBD13C9JR72 458 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 RNASEH1O60930 286 aaKnown RBP13.51□□□□□ -0.25
COL8A1-202ENST00000273342 CCNE2O96020 404 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 CCNFP41002 786 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 AQP5P55064 265 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 NCKAP1LP55160 1127 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 SLC25A3Q00325 362 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 ORC1Q13415 861 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 PEX6Q13608 980 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 TFDP3Q5H9I0 405 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 MAP4K3Q8IVH8 894 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 VPS11Q9H270 941 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 NDE1Q9NXR1 346 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 PACSIN3Q9UKS6 424 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 NUB1Q9Y5A7 615 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 COL5A3P25940 1745 aaPredicted RBP13.51□□□□□ -0.25
COL8A1-202ENST00000273342 A6NJR5 290 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 PRR5-ARHGAP8B1AHC4 643 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 TRIM49D1C9J1S8 452 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 ABLIM1O14639 778 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 UGT1A9O60656 530 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 LIG4P49917 911 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 HIRAP54198 1017 aaPredicted RBP13.51□□□□□ -0.25
COL8A1-202ENST00000273342 ARHGAP8P85298 464 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 PRKD1Q15139 912 aaPredicted RBP13.51□□□□□ -0.25
COL8A1-202ENST00000273342 CNPY1Q3B7I2 92 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 PLEKHA7Q6IQ23 1121 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 PDIK1LQ8N165 341 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 KCTD17Q8N5Z5 321 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 SMC1BQ8NDV3 1235 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 ZNF606Q8WXB4 792 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 MFSD14AQ96MC6 490 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 TAAR1Q96RJ0 339 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 MMP19Q99542 508 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 EBF4Q9BQW3 602 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 CALN1Q9BXU9 219 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 ACSS3Q9H6R3 686 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 UGT1A7Q9HAW7 530 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 UGT1A10Q9HAW8 530 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 UGT1A8Q9HAW9 530 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 AGO4Q9HCK5 861 aaKnown RBP13.51□□□□□ -0.25
COL8A1-202ENST00000273342 IP6K2Q9UHH9 426 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 SLC7A8Q9UHI5 535 aa13.51□□□□□ -0.25
COL8A1-202ENST00000273342 TCRBV9S1A1TA0A576 114 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 F5H423 210 aaPredicted RBP13.5□□□□□ -0.25
COL8A1-202ENST00000273342 POLRMTO00411 1230 aaKnown RBP13.5□□□□□ -0.25
COL8A1-202ENST00000273342 COPEO14579 308 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 CIB2O75838 187 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 PDE5AO76074 875 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 DSG1Q02413 1049 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 BST1Q10588 318 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 CUL2Q13617 745 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 NPNTQ6UXI9 565 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 PPIL6Q8IXY8 311 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 ULK2Q8IYT8 1036 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 CCDC33Q8N5R6 958 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 OR5B17Q8NGF7 314 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 MZB1Q8WU39 189 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 HSPH1Q92598 858 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 MTBPQ96DY7 904 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 IWS1Q96ST2 819 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 ASCC2Q9H1I8 757 aaPredicted RBP13.5□□□□□ -0.25
COL8A1-202ENST00000273342 RAVER2Q9HCJ3 691 aaKnown RBP13.5□□□□□ -0.25
COL8A1-202ENST00000273342 SHOC2Q9UQ13 582 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 ZBTB12Q9Y330 459 aaPredicted RBP13.5□□□□□ -0.25
COL8A1-202ENST00000273342 PIK3R2O00459 728 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 PLSCR1O15162 318 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 RAD17O75943 681 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 VNN1O95497 513 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 CDKN2BP42772 138 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 CHI3L2Q15782 390 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 CES4AQ5XG92 561 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 CEP128Q6ZU80 1094 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 NMD3Q96D46 503 aaKnown RBP13.5□□□□□ -0.25
COL8A1-202ENST00000273342 SRPK1Q96SB4 655 aaKnown RBP13.5□□□□□ -0.25
COL8A1-202ENST00000273342 ZNF212Q9UDV6 495 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 OR6B1O95007 311 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 WEE2P0C1S8 567 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 SLC18A1P54219 525 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 PTP4A2Q12974 167 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 HSF5Q4G112 596 aaPredicted RBP13.5□□□□□ -0.25
COL8A1-202ENST00000273342 DPH6Q7L8W6 267 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 USP37Q86T82 979 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 RASSF3Q86WH2 238 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 SLC26A7Q8TE54 656 aa13.5□□□□□ -0.25
COL8A1-202ENST00000273342 ECSITQ9BQ95 431 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms